Threat, challenges, and preparedness for future pandemics: A descriptive review of phylogenetic analysis based predictions

被引:33
作者
Behl, Amanpreet [1 ]
Nair, Ashrit [2 ]
Mohagaonkar, Sanika [3 ]
Yadav, Pooja [4 ]
Gambhir, Kirtida [5 ]
Tyagi, Nishant [5 ]
Sharma, Rakesh Kumar [6 ]
Butola, Bhupendra Singh [2 ]
Sharma, Navneet [2 ]
机构
[1] Jamia Hamdard, Dept Mol Med, Delhi 110062, India
[2] Indian Inst Technol, Dept Text & Fibre Engn, New Delhi 110016, India
[3] Imperial Coll, Dept Metab Digest & Reprod, London, England
[4] Jamia Hamdard, Dept Med Elementol & Toxicol, New Delhi 110062, India
[5] Def Res & Dev Org, Inst Nucl Med & Allied Sci, Stem Cell & Gene Therapy Res Grp, Delhi 110054, India
[6] Saveetha Inst Med & Tech Sci, 162 Poonamallee High Rd, Chennai 600077, Tamil Nadu, India
关键词
Zoonotic diseases; SARS; Infectious disease; Emerging infectious diseases; RNA; Phylogenetic analysis; MOLECULAR EPIDEMIOLOGY; EVOLUTIONARY RATE; VIRUS; DISEASE; ORIGIN; HIV-1; RECOMBINATION; PARAMYXOVIRUS; CONSEQUENCES; CORONAVIRUS;
D O I
10.1016/j.meegid.2022.105217
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
For centuries the world has been confronted with many infectious diseases, with a potential to turn into a pandemic posing a constant threat to human lives. Some of these pandemics occurred due to the emergence of new disease or re-emergence of previously known diseases with a few mutations. In such scenarios their optimal prevention and control options were not adequately developed. Most of these diseases are highly contagious and for their timely control, knowledge about the pathogens and disease progression is the basic necessity. In this review, we have presented a documented chronology of the earlier pandemics, evolutionary analysis of the infectious disease with pandemic potential, the role of RNA, difficulties in controlling pandemics, and the likely pathogens that could trigger future pandemics. In this study, the evolutionary history of the pathogens was identified by carrying out phylogenetic analysis. The percentage similarity between different infectious diseases is critically analysed for the identification of their correlation using online sequence matcher tools. The Baltimore classification system was used for finding the genomic nature of the viruses. It was observed that most of the infectious pathogens rise from their animal hosts with some mutations in their genome composition. The phylogenetic tree shows that the single-stranded RNA diseases have a common origin and many of them are having high similarity percentage. The outcomes of this study will help in the identification of potential pathogens that can cause future pandemics. This information will be helpful in the development of early detection techniques, devising preventive mechanism to limit their spread, prophylactic measures, Infection control and therapeutic options, thereby, strengthening our approach towards global preparedness against future pandemics.
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页数:17
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