Whole-exome sequencing identifies de novo mutation in the COL1A1 gene to underlie the severe osteogenesis imperfecta

被引:11
作者
Maasalu, Katre [1 ,2 ]
Nikopensius, Tiit [3 ,4 ]
Koks, Sulev [5 ]
Noukas, Margit [3 ,4 ]
Kals, Mart [3 ]
Prans, Ele [4 ]
Zhytnik, Lidiia [1 ]
Metspalu, Andres [3 ,4 ,6 ]
Maertson, Aare [1 ,2 ]
机构
[1] Univ Tartu, Clin Traumatol & Orthopaed, EE-51014 Tartu, Estonia
[2] Tartu Univ Hosp, Clin Traumatol & Orthopaed, EE-51014 Tartu, Estonia
[3] Univ Tartu, Estonian Genome Ctr, EE-51010 Tartu, Estonia
[4] Univ Tartu, Inst Mol & Cell Biol, EE-51010 Tartu, Estonia
[5] Univ Tartu, Dept Pathophysiol, EE-50411 Tartu, Estonia
[6] Estonian Bioctr, EE-51010 Tartu, Estonia
基金
欧盟第七框架计划;
关键词
Osteogenesis imperfecta; Type I collagen; OI genotype-phenotype; COL1A1; De novo mutation; BINDING SITES; COLLAGEN; PROTEIN; WNT1;
D O I
10.1186/s40246-015-0028-0
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Osteogenesis imperfecta (OI) comprises a clinically and genetically heterogeneous group of connective tissue disorders, characterized by low bone mass, increased bone fragility, and blue-gray eye sclera. OI often results from missense mutations in one of the conserved glycine residues present in the Gly-X-Y sequence repeats of the triple helical region of the collagen type I a chain, which is encoded by the COL1A1 gene. The aim of the present study is to describe the phenotype of OI II patient and a novel mutation, causing current phenotype. Results: We report an undescribed de novo COL1A1 mutation in a patient affected by severe OI. After performing the whole-exome sequencing in a case parent-child trio, we identified a novel heterozygous c.2317G > T missense mutation in the COL1A1 gene, which leads to p.Gly773Cys transversion in the triple helical domain of the collagen type I a chain. The presence of the missense mutation was confirmed with the Sanger sequencing. Conclusions: Hereby, we report a novel mutation in the COL1A1 gene causing severe, life threatening OI and indicate the role of de novo mutation in the pathogenesis of rare familial diseases. Our study underlines the importance of exome sequencing in disease gene discovery for families where conventional genetic testing does not give conclusive evidence.
引用
收藏
页数:5
相关论文
共 22 条
[1]   A method and server for predicting damaging missense mutations [J].
Adzhubei, Ivan A. ;
Schmidt, Steffen ;
Peshkin, Leonid ;
Ramensky, Vasily E. ;
Gerasimova, Anna ;
Bork, Peer ;
Kondrashov, Alexey S. ;
Sunyaev, Shamil R. .
NATURE METHODS, 2010, 7 (04) :248-249
[2]   Severe Osteogenesis Imperfecta Caused by a Small In-Frame Deletion in CRTAP [J].
Ben Amor, I. M. ;
Rauch, F. ;
Gruenwald, K. ;
Weis, M. ;
Eyre, D. R. ;
Roughley, P. ;
Glorieux, F. H. ;
Morello, R. .
AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2011, 155A (11) :2865-2870
[3]   Genotype-Phenotype Correlations in Autosomal Dominant Osteogenesis Imperfecta [J].
Ben Amor, I. Mouna ;
Glorieux, Francis H. ;
Rauch, Frank .
JOURNAL OF OSTEOPOROSIS, 2011, 2011
[4]  
Ben Amor M, 2013, PEDIATR ENDOCR REV P, V10, P397
[5]   Predicting the clinical lethality of osteogenesis imperfecta from collagen glycine mutations [J].
Bodian, Dale L. ;
Madhan, Balaraman ;
Brodsky, Barbara ;
Klein, Teri E. .
BIOCHEMISTRY, 2008, 47 (19) :5424-5432
[6]   Mutation and polymorphism spectrum in osteogenesis imperfecta type II: implications for genotype-phenotype relationships [J].
Bodian, Dale L. ;
Chan, Ting-Fung ;
Poon, Annie ;
Schwarze, Ulrike ;
Yang, Kathleen ;
Byers, Peter H. ;
Kwok, Pui-Yan ;
Klein, Teri E. .
HUMAN MOLECULAR GENETICS, 2009, 18 (03) :463-471
[7]  
BYERS PH, 1992, ANNU REV MED, V43, P269, DOI 10.1146/annurev.me.43.020192.001413
[8]   Natural variation in four human collagen genes across an ethnically diverse population [J].
Chan, Ting-Fung ;
Poon, Annie ;
Basu, Analabha ;
Addleman, Nick R. ;
Chen, Justin ;
Phong, Angie ;
Byers, Peter H. ;
Klein, Teri E. ;
Kwok, Pui-Yan .
GENOMICS, 2008, 91 (04) :307-314
[9]   Mapping the ligand-binding sites and disease-associated mutations on the most abundant protein in the human, type I collagen [J].
Di Lullo, GA ;
Sweeney, SM ;
Körkkö, J ;
Ala-Kokko, L ;
San Antonio, JD .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (06) :4223-4231
[10]   Mutations in WNT1 are a cause of osteogenesis imperfecta [J].
Fahiminiya, Somayyeh ;
Majewski, Jacek ;
Mort, John ;
Moffatt, Pierre ;
Glorieux, Francis H. ;
Rauch, Frank .
JOURNAL OF MEDICAL GENETICS, 2013, 50 (05) :345-348