Backbone assignment of perdeuterated proteins using long-range H/C-dipolar transfers
被引:15
作者:
Linser, Rasmus
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机构:
Univ New S Wales, Analyt Ctr, Sydney, NSW 2052, Australia
Univ New S Wales, Sch Chem, Sydney, NSW 2052, AustraliaUniv New S Wales, Analyt Ctr, Sydney, NSW 2052, Australia
Linser, Rasmus
[1
,2
]
机构:
[1] Univ New S Wales, Analyt Ctr, Sydney, NSW 2052, Australia
[2] Univ New S Wales, Sch Chem, Sydney, NSW 2052, Australia
For micro-crystalline proteins, solid-state nuclear magnetic resonance spectroscopy of perdeuterated samples can provide spectra of unprecedented quality. Apart from allowing to detect sparsely introduced protons and thereby increasing the effective resolution for a series of sophisticated techniques, deuteration can provide extraordinary coherence lifetimes-obtainable for all involved nuclei virtually without decoupling and enabling the use of scalar magnetization transfers. Unfortunately, for fibrillar or membrane-embedded proteins, significantly shorter transverse relaxation times have been encountered as compared to micro-crystalline proteins despite an identical sample preparation, calling for alternative strategies for resonance assignment. In this work we propose an approach towards sequential assignment of perdeuterated proteins based on long-range H-1/C-13 Cross Polarization transfers. This strategy gives rise to H/N-separated correlations involving C-alpha, C-beta, and CO chemical shifts of both, intra- and interresidual contacts, and thus connecting adjacent residues independent of transverse relaxation times.
机构:
Iowa State Univ, Dept Chem, Ames, IA 50011 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Cady, Sarah D.
;
Schmidt-Rohr, Klaus
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Iowa State Univ, Dept Chem, Ames, IA 50011 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Schmidt-Rohr, Klaus
;
Wang, Jun
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机构:
Univ Penn, Sch Med, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
Univ Penn, Dept Chem, Philadelphia, PA 19104 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Wang, Jun
;
Soto, Cinque S.
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机构:
Univ Penn, Sch Med, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
Univ Penn, Dept Chem, Philadelphia, PA 19104 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Soto, Cinque S.
;
DeGrado, William F.
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机构:
Univ Penn, Sch Med, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
Univ Penn, Dept Chem, Philadelphia, PA 19104 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
DeGrado, William F.
;
Hong, Mei
论文数: 0引用数: 0
h-index: 0
机构:
Iowa State Univ, Dept Chem, Ames, IA 50011 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
机构:
Iowa State Univ, Dept Chem, Ames, IA 50011 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Cady, Sarah D.
;
Schmidt-Rohr, Klaus
论文数: 0引用数: 0
h-index: 0
机构:
Iowa State Univ, Dept Chem, Ames, IA 50011 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Schmidt-Rohr, Klaus
;
Wang, Jun
论文数: 0引用数: 0
h-index: 0
机构:
Univ Penn, Sch Med, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
Univ Penn, Dept Chem, Philadelphia, PA 19104 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Wang, Jun
;
Soto, Cinque S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Penn, Sch Med, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
Univ Penn, Dept Chem, Philadelphia, PA 19104 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
Soto, Cinque S.
;
DeGrado, William F.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Penn, Sch Med, Dept Biochem & Biophys, Philadelphia, PA 19104 USA
Univ Penn, Dept Chem, Philadelphia, PA 19104 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA
DeGrado, William F.
;
Hong, Mei
论文数: 0引用数: 0
h-index: 0
机构:
Iowa State Univ, Dept Chem, Ames, IA 50011 USAIowa State Univ, Dept Chem, Ames, IA 50011 USA