Backbone assignment of perdeuterated proteins using long-range H/C-dipolar transfers

被引:15
作者
Linser, Rasmus [1 ,2 ]
机构
[1] Univ New S Wales, Analyt Ctr, Sydney, NSW 2052, Australia
[2] Univ New S Wales, Sch Chem, Sydney, NSW 2052, Australia
关键词
MAS solid-state NMR; Magic angle spinning; Perdeuteration; Proton detection; Backbone assignment; Cross polarization; SOLID-STATE NMR; ANGLE-SPINNING NMR; AMYLOID FIBRILS; SPECTROSCOPY; RESOLUTION; DYNAMICS; IDENTIFICATION; SPECTRA; PROTONS; MODEL;
D O I
10.1007/s10858-011-9593-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
For micro-crystalline proteins, solid-state nuclear magnetic resonance spectroscopy of perdeuterated samples can provide spectra of unprecedented quality. Apart from allowing to detect sparsely introduced protons and thereby increasing the effective resolution for a series of sophisticated techniques, deuteration can provide extraordinary coherence lifetimes-obtainable for all involved nuclei virtually without decoupling and enabling the use of scalar magnetization transfers. Unfortunately, for fibrillar or membrane-embedded proteins, significantly shorter transverse relaxation times have been encountered as compared to micro-crystalline proteins despite an identical sample preparation, calling for alternative strategies for resonance assignment. In this work we propose an approach towards sequential assignment of perdeuterated proteins based on long-range H-1/C-13 Cross Polarization transfers. This strategy gives rise to H/N-separated correlations involving C-alpha, C-beta, and CO chemical shifts of both, intra- and interresidual contacts, and thus connecting adjacent residues independent of transverse relaxation times.
引用
收藏
页码:151 / 158
页数:8
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