A Continuous Enzyme-Coupled Assay for Triphosphohydrolase Activity of HIV-1 Restriction Factor SAMHD1

被引:34
作者
Arnold, Laurence H. [1 ]
Kunzelmann, Simone [2 ]
Webb, Martin R. [2 ]
Taylor, Ian A. [1 ]
机构
[1] Natl Inst Med Res, MRC, Div Mol Struct, London NW7 1AA, England
[2] Natl Inst Med Res, MRC, Div Phys Biochem, London NW7 1AA, England
基金
英国医学研究理事会;
关键词
REVERSE-TRANSCRIPTASE INHIBITORS; DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE; SACCHAROMYCES-CEREVISIAE; INORGANIC-PHOSPHATE; SOLUBLE EXOPOLYPHOSPHATASE; MITOCHONDRIAL-DNA; INFECTION; CELLS; PURIFICATION; REPLICATION;
D O I
10.1128/AAC.03903-14
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The development of deoxynucleoside triphosphate (dNTP)-based drugs requires a quantitative understanding of any inhibition, activation, or hydrolysis by off-target cellular enzymes. SAMHD1 is a regulatory dNTP-triphosphohydrolase that inhibits HIV-1 replication in human myeloid cells. We describe here an enzyme-coupled assay for quantifying the activation, inhibition, and hydrolysis of dNTPs, nucleotide analogues, and nucleotide analogue inhibitors by triphosphohydrolase enzymes. The assay facilitates mechanistic studies of triphosphohydrolase enzymes and the quantification of off-target effects of nucleotide-based antiviral and chemotherapeutic agents.
引用
收藏
页码:186 / 192
页数:7
相关论文
共 35 条
[1]   GTP Is the Primary Activator of the Anti-HIV Restriction Factor SAMHD1 [J].
Amie, Sarah M. ;
Bambara, Robert A. ;
Kim, Baek .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (35) :25001-25006
[2]   Anti-HIV Host Factor SAMHD1 Regulates Viral Sensitivity to Nucleoside Reverse Transcriptase Inhibitors via Modulation of Cellular Deoxyribonucleoside Triphosphate (dNTP) Levels [J].
Amie, Sarah M. ;
Daly, Michele B. ;
Noble, Erin ;
Schinazi, Raymond F. ;
Bambara, Robert A. ;
Kim, Baek .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2013, 288 (28) :20683-20691
[3]   Purification and properties of exopolyphosphatase from the cytosol of Saccharomyces cerevisiae not encoded by the PPX1 gene [J].
Andreeva, NA ;
Kulakovskaya, TV ;
Kulaev, IS .
BIOCHEMISTRY-MOSCOW, 2004, 69 (04) :387-393
[4]   Defects in maintenance of mitochondrial DNA are associated with intramitochondrial nucleotide imbalances [J].
Ashley, Neil ;
Adams, Susan ;
Slama, Abdelhamid ;
Zeviani, Massimo ;
Suomalainen, Anu ;
Andreu, Antonio L. ;
Naviaux, Robert K. ;
Poulton, Joanna .
HUMAN MOLECULAR GENETICS, 2007, 16 (12) :1400-1411
[5]   SAMHD1 restricts HIV-1 infection in resting CD4+ T cells [J].
Baldauf, Hanna-Mari ;
Pan, Xiaoyu ;
Erikson, Elina ;
Schmidt, Sarah ;
Daddacha, Waaqo ;
Burggraf, Manja ;
Schenkova, Kristina ;
Ambiel, Ina ;
Wabnitz, Guido ;
Gramberg, Thomas ;
Panitz, Sylvia ;
Flory, Egbert ;
Landau, Nathaniel R. ;
Sertel, Serkan ;
Rutsch, Frank ;
Lasitschka, Felix ;
Kim, Baek ;
Koenig, Renate ;
Fackler, Oliver T. ;
Keppler, Oliver T. .
NATURE MEDICINE, 2012, 18 (11) :1682-+
[6]   SAMHD1 Specifically Affects the Antiviral Potency of Thymidine Analog HIV Reverse Transcriptase Inhibitors [J].
Ballana, Ester ;
Badia, Roger ;
Terradas, Gerard ;
Torres-Torronteras, Javier ;
Ruiz, Alba ;
Pauls, Eduardo ;
Riveira-Munoz, Eva ;
Clotet, Bonaventura ;
Marti, Ramon ;
Este, Jose A. .
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY, 2014, 58 (08) :4804-4813
[7]   Mouse SAMHD1 Has Antiretroviral Activity and Suppresses a Spontaneous Cell-Intrinsic Antiviral Response [J].
Behrendt, Rayk ;
Schumann, Tina ;
Gerbaulet, Alexander ;
Nguyen, Laura A. ;
Schubert, Nadja ;
Alexopoulou, Dimitra ;
Berka, Ursula ;
Lienenklaus, Stefan ;
Peschke, Katrin ;
Gibbert, Kathrin ;
Wittmann, Sabine ;
Lindemann, Dirk ;
Weiss, Siegfried ;
Dahl, Andreas ;
Naumann, Ronald ;
Dittmer, Ulf ;
Kim, Baek ;
Mueller, Werner ;
Gramberg, Thomas ;
Roers, Axel .
CELL REPORTS, 2013, 4 (04) :689-696
[8]   Nucleotide Deficiency Promotes Genomic Instability in Early Stages of Cancer Development [J].
Bester, Assaf C. ;
Roniger, Maayan ;
Oren, Yifat S. ;
Im, Michael M. ;
Sarni, Dan ;
Chaoat, Malka ;
Bensimon, Aaron ;
Zamir, Gideon ;
Shewach, Donna S. ;
Kerem, Batsheva .
CELL, 2011, 145 (03) :435-446
[9]   Mechanism of inorganic phosphate interaction with phosphate binding protein from Escherichia coli [J].
Brune, M ;
Hunter, JL ;
Howell, SA ;
Martin, SR ;
Hazlett, TL ;
Corrie, JET ;
Webb, MR .
BIOCHEMISTRY, 1998, 37 (29) :10370-10380
[10]   DIRECT, REAL-TIME MEASUREMENT OF RAPID INORGANIC-PHOSPHATE RELEASE USING A NOVEL FLUORESCENT-PROBE AND ITS APPLICATION TO ACTOMYOSIN SUBFRAGMENT-1 ATPASE [J].
BRUNE, M ;
HUNTER, JL ;
CORRIE, JET ;
WEBB, MR .
BIOCHEMISTRY, 1994, 33 (27) :8262-8271