Characterization of the complete chloroplast genome sequence of Aster hersileoides (Asteraceae, Astereae) and its phylogenetic implications

被引:3
|
作者
Ou, Chuan-Zhou [1 ]
Feng, Yan-Lei [2 ]
Hu, Yu-Kun [3 ]
Tian, Xiang-Yu [4 ]
Fu, Zhi-Xi [1 ,5 ]
机构
[1] Sichuan Normal Univ, Coll Life Sci, Chengdu, Sichuan, Peoples R China
[2] Univ Munster, Inst Evolut & Biodivers, Munster, Germany
[3] Chinese Acad Forestry, Inst Wetland Res, Beijing, Peoples R China
[4] Beijing Normal Univ, Coll Life Sci, Beijing, Peoples R China
[5] Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, Beijing, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
关键词
Asteraceae; Aster hersileoides; chloroplast genome; endemic species;
D O I
10.1080/23802359.2019.1581109
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
This study was the first report about the complete chloroplast genome of Aster hersileoides (Asteraceae, Astereae). The circular whole cp genome of A. hersileoides was 152,345 bp in length, contained a large single copy (LSC) region of 84,124 bp and a small single copy (SSC) region of 18,243 bp. These two regions were separated by a pair of inverted repeat regions (IRa and IRb), each of them 24,989 bp in length. A total of 134 functional genes were encoded, consisted of 89 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the chloroplast genome sequence was 37.3% and the GC contents of the LSC, SSC, and IR regions were 32.6, 31.2, and 43.0%, respectively. The phylogenetic hypotheses obtained based on the analyses of 20 cp genomes places A. hersileoides within the tribe Astereae of Asteraceae.
引用
收藏
页码:985 / 986
页数:2
相关论文
共 50 条
  • [1] Characterization of the complete chloroplast genome sequence of Chinese endemic species of Aster batangensis (Asteraceae: Astereae) and its phylogenetic implications
    Xie, Jiani
    Yong, Yuan
    Li, Tian
    Lv, Yaqi
    Zou, Luyao
    Li, Tingyu
    Li, Zhuojin
    Fu, Zhixi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3224 - 3225
  • [2] Characterization of the complete chloroplast genome sequence of Gymnocoronis spilanthoides (Asteraceae, Eupatorieae) and its phylogenetic implications
    Fu, Zhi-Xi
    Wang, Xiu-Hua
    Ou, Chuan-Zhou
    Lu, Xin
    Hu, Jun
    He, Gang
    Tian, Xiang-Yu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 694 - 695
  • [3] The complete chloroplast genome of Aster hypoleucus (Asteraceae: Astereae): an endemic species from China
    Wang, Qian
    Wang, Xiu-Hua
    Yang, Xiao-Cheng
    Fu, Long-Fei
    Gong, Qiu-Ju
    Fu, Zhi-Xi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2647 - 2648
  • [4] Characterization of the complete chloroplast genome sequence of Dalbergia species and its phylogenetic implications
    Yun Song
    Yongjiang Zhang
    Jin Xu
    Weimin Li
    MingFu Li
    Scientific Reports, 9
  • [5] Characterization of the complete chloroplast genome sequence of Galinsoga parviflora and its phylogenetic implications
    Zhang, Zhiyong
    Chen, Ying
    Jiang, Xuebo
    Zhu, Piao
    Zeng, Yanling
    Tang, Tianming
    Li, Ling
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2106 - 2108
  • [6] Characterization of the complete chloroplast genome sequence of Dalbergia species and its phylogenetic implications
    Song, Yun
    Zhang, Yongjiang
    Xu, Jin
    Li, Weimin
    Li, MingFu
    SCIENTIFIC REPORTS, 2019, 9 (1)
  • [7] Characterization of the complete chloroplast genome sequence of Pennisetum glaucum and its phylogenetic implications
    Xu, Jin
    Song, Yun
    Jing, Xiaoyan
    Li, Mingfu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3764 - 3765
  • [8] Characterization of the complete chloroplast genome sequence of Conyza canadensis and its phylogenetic implications
    Zhang, Zhiyong
    Jiang, Xuebo
    Chen, Ying
    Zhu, Piao
    Li, Ling
    Zeng, Yanling
    Tang, Tianming
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01): : 2028 - 2030
  • [9] Characterization of the complete chloroplast genome sequence of Tinospora sagittata and its phylogenetic implications
    Peng, Cuiying
    Liang, Junsheng
    Xie, Qiaoying
    Wang, Xujun
    Guo, Wei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 176 - 177
  • [10] The complete chloroplast genome of Aster altaicus Willd. (Asteraceae: Aster) and phylogenetic analysis
    Wang, Xin-You
    Liu, Ying
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (08): : 819 - 822