Long Noncoding RNAs in the Pathogenesis of Barrett's Esophagus and Esophageal Carcinoma

被引:56
作者
Abraham, John M.
Meltzer, Stephen J. [1 ,2 ]
机构
[1] Johns Hopkins Univ, Sch Med, Dept Med, Div Gastroenterol, Baltimore, MD 21287 USA
[2] Johns Hopkins Univ, Sch Med, Sidney Kimmel Comprehens Canc Ctr, Baltimore, MD 21287 USA
关键词
lncRNAs; Barrett's Esophagus; Esophageal Carcinoma; SQUAMOUS-CELL CARCINOMA; ACTIN-FILAMENT INTEGRITY; IN-SITU HYBRIDIZATION; ULTRACONSERVED ELEMENTS; POOR-PROGNOSIS; UP-REGULATION; C-ELEGANS; EXPRESSION; CANCER; ADENOCARCINOMA;
D O I
10.1053/j.gastro.2017.04.046
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
For many years, only a small fraction of the human genome was believed to regulate cell function and development. This protein-coding portion composed only 1% to 2% of 3 billion human DNA base pairs-the remaining sequence was classified as junk DNA. Subsequent research has revealed that most of the genome is transcribed into a broad array of noncoding RNAs, ranging in size from microRNA (20-23 nucleotides) to long noncoding RNA (lncRNA, more than 200 nucleotides). These noncoding RNA classes have been shown to use diverse molecular mechanisms to control gene expression and organ system development. As anticipated, alterations in this large control system can contribute to disease pathogenesis and carcinogenesis. We review the involvement of noncoding RNAs, lncRNAs in particular, in development of Barrett's esophagus and esophageal carcinoma.
引用
收藏
页码:27 / 34
页数:8
相关论文
共 75 条
[1]   Epigenetic Control of the Genome-Lessons from Genomic Imprinting [J].
Adalsteinsson, Bjorn T. ;
Ferguson-Smith, Anne C. .
GENES, 2014, 5 (03) :635-655
[2]  
Badillo Raul, 2014, World J Gastrointest Pharmacol Ther, V5, P105, DOI 10.4292/wjgpt.v5.i3.105
[3]   Ultraconserved elements Genomics, function and disease [J].
Baira, Eirini ;
Greshock, Joel ;
Coukos, George ;
Zhang, Lin .
RNA BIOLOGY, 2008, 5 (03) :132-134
[4]   The intrinsic ability of AFAP-110 to alter actin filament integrity is linked with its ability to also activate cellular tyrosine kinases [J].
Baisden, JM ;
Gatesman, AS ;
Cherezova, L ;
Jiang, BH ;
Flynn, DC .
ONCOGENE, 2001, 20 (45) :6607-6616
[5]   MicroRNA Expression Signatures During Malignant Progression From Barrett's Esophagus [J].
Bansal, Ajay ;
Gupta, Vijayalaxmi ;
Wang, Kenneth .
JOURNAL OF CELLULAR BIOCHEMISTRY, 2016, 117 (06) :1288-1295
[6]   Ultraconserved elements in the human genome [J].
Bejerano, G ;
Pheasant, M ;
Makunin, I ;
Stephen, S ;
Kent, WJ ;
Mattick, JS ;
Haussler, D .
SCIENCE, 2004, 304 (5675) :1321-1325
[7]   Barrett's esophagus: review of diagnosis and treatment [J].
Biyyani, Raja Shekhar Sappati ;
Chak, Amithab .
GASTROENTEROLOGY REPORT, 2013, 1 (01) :9-18
[8]   Expression and functional role of a transcribed noncoding RNA with an ultraconserved element in hepatocellular carcinoma [J].
Braconi, Chiara ;
Valeri, Nicola ;
Kogure, Takayuki ;
Gasparini, Pierluigi ;
Huang, Nianyuan ;
Nuovo, Gerard J. ;
Terracciano, Luigi ;
Croce, Carlo M. ;
Patel, Tushar .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (02) :786-791
[9]   Profiling of circulating microRNAs in patients with Barrett's esophagus and esophageal adenocarcinoma [J].
Bus, Pauline ;
Kestens, Christine ;
Ten Kate, Fiebo Jan Willem ;
Peters, Wilbert ;
Drenth, Joost Paulus Hubertus ;
Roodhart, Jeanine Merel Leonoor ;
Siersema, Peter Derk ;
van Baal, Jantine Wilhelmina Paula Maria .
JOURNAL OF GASTROENTEROLOGY, 2016, 51 (06) :560-570
[10]   SNRNAS, SNRNPS, AND RNA PROCESSING [J].
BUSCH, H ;
REDDY, R ;
ROTHBLUM, L ;
CHOI, YC .
ANNUAL REVIEW OF BIOCHEMISTRY, 1982, 51 :617-654