Comprehensive analysis of pyroptosis regulators and tumor immune microenvironment in clear cell renal cell carcinoma

被引:16
|
作者
Zhang, Yan [1 ]
Chen, Xianwu [1 ]
Fu, Qinghe [1 ]
Wang, Feifan [1 ]
Zhou, Xuejian [1 ]
Xiang, Jiayong [1 ]
He, Ning [1 ]
Hu, Zhenghui [1 ]
Jin, Xiaodong [1 ]
机构
[1] Zhejiang Univ, Affiliated Hosp 1, Dept Urol, Sch Med, Hangzhou 310003, Zhejiang, Peoples R China
基金
中国国家自然科学基金;
关键词
Clear cell renal cell carcinoma; Pyroptosis; Tumor immune microenvironment; Immune checkpoints; Immunotherapy; COLORECTAL-CANCER; INFLAMMASOME; EXPRESSION;
D O I
10.1186/s12935-021-02384-y
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background Increasing evidence has indicated that pyroptosis could regulate the tumor immune microenvironment (TIME) to affect the tumor development. As a highly immunogenic tumor, clear cell renal cell carcinoma (ccRCC) can benefit from immunotherapy, but related research on pyroptosis in the TIME of ccRCC is still deficient. Methods Available data derived from TCGA and GEO databases were analyzed to identify the different expression profiles of pyroptosis in ccRCC and normal tissues, and the correlation of pyroptosis regulators with TIME was evaluated in ccRCC. Results According to consensus clustering analysis, two differential expression levels of subtypes were identified to affect patient prognosis, and were related to histological tumor stage and grade. Immune cells were calculated by the CIBERSORT algorithm. Higher infiltrated levels of B cells naive, T cells CD4 memory resting, NK cells resting, monocytes, macrophages were observed in Cluster 1, while higher infiltrated levels of CD8(+) T cells, T follicular helper cells, and Tregs were observed in Cluster 2. Gene set enrichment analysis indicated that Cluster 2 was enriched in multiple immune-related pathways, including the JAK-STAT signaling pathway. Moreover, overexpression of eight immune checkpoints was related to ccRCC development, especially in Cluster 2. As four potentially key pyroptosis regulators, AIM2, CASP5, NOD2, and GZMB were confirmed to be upregulated in ccRCC by RT-qPCR analysis and further verified by the HPA database. Further pan-cancer analysis suggested that these four pyroptosis regulators were differentially expressed and related to the TIME in multiple cancers. Conclusion The present study provided a comprehensive view of pyroptosis regulators in the TIME of ccRCC, which may provide potential value for immunotherapy.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Comprehensive analysis of pyroptosis regulators and tumor immune microenvironment in clear cell renal cell carcinoma
    Yan Zhang
    Xianwu Chen
    Qinghe Fu
    Feifan Wang
    Xuejian Zhou
    Jiayong Xiang
    Ning He
    Zhenghui Hu
    Xiaodong Jin
    Cancer Cell International, 21
  • [2] Pyroptosis Regulators and Tumor Microenvironment Infiltration Characterization in Clear Cell Renal Cell Carcinoma
    Zhang, Xi
    Wei, Xiyi
    Wang, Yichun
    Wang, Shuai
    Ji, Chengjian
    Yao, Liangyu
    Song, Ninghong
    FRONTIERS IN ONCOLOGY, 2022, 11
  • [3] The Tumor Immune Microenvironment in Clear Cell Renal Cell Carcinoma
    Monjaras-Avila, Cesar U.
    Lorenzo-Leal, Ana C.
    Luque-Badillo, Ana C.
    D'Costa, Ninadh
    Chavez-Munoz, Claudia
    Bach, Horacio
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (09)
  • [4] Tumor Microenvironment in Clear Cell Renal Cell Carcinoma: A Comprehensive Analysis
    Guo, Zhuangyu
    Wang, Xue
    Huang, Shuaishuai
    Weng, Guobin
    IRANIAN JOURNAL OF PUBLIC HEALTH, 2024, 53 (11) : 2538 - 2550
  • [5] Comprehensive Analysis of the Immune Infiltrates of Pyroptosis in Kidney Renal Clear Cell Carcinoma
    Sun, Zhuolun
    Jing, Changying
    Guo, Xudong
    Zhang, Mingxiao
    Kong, Feng
    Wang, Zhenqing
    Jiang, Shaobo
    Wang, Hanbo
    FRONTIERS IN ONCOLOGY, 2021, 11
  • [6] Comprehensive analysis of immune ferroptosis gene in renal clear cell carcinoma: prognosis and influence of tumor microenvironment
    Yang, Lin-Hui
    Xu, Li-Zhen
    Huang, Zhi-Jian
    Pan, Hong-Hong
    Wu, Min
    Wu, Qiu-Yan
    Lu, Tao
    Zhang, Yan-Ping
    Zhu, Yao-Bin
    Wu, Jia-Bin
    Luo, Jie-Wei
    Yang, Guo-Kai
    Ye, Lie-Fu
    AMERICAN JOURNAL OF TRANSLATIONAL RESEARCH, 2022, 14 (09): : 5982 - +
  • [7] Comprehensive analysis of heat shock protein 110, 90, 70, 60 families and tumor immune microenvironment characterization in clear cell renal cell carcinoma
    Liao, Wenjing
    Huang, Mao
    Du, Xiaoyi
    Tang, Liangdan
    Li, Junwu
    Tang, Qin
    SCIENTIFIC REPORTS, 2025, 15 (01):
  • [8] Roles of the Dynamic Tumor Immune Microenvironment in the Individualized Treatment of Advanced Clear Cell Renal Cell Carcinoma
    Lin, Enyu
    Liu, Xuechao
    Liu, Yanjun
    Zhang, Zedan
    Xie, Lu
    Tian, Kaiwen
    Liu, Jiumin
    Yu, Yuming
    FRONTIERS IN IMMUNOLOGY, 2021, 12
  • [9] Comprehensive analysis of 7-methylguanosine and immune microenvironment characteristics in clear cell renal cell carcinomas
    Xiao, Yu
    Yang, Junfeng
    Yang, Maolin
    Len, Jinjun
    Yu, Yanhong
    FRONTIERS IN GENETICS, 2022, 13
  • [10] Comprehensive analysis of the importance of PLAUR in the progression and immune microenvironment of renal clear cell carcinoma
    Wang, Zhiwei
    Wang, Kunxiong
    Gao, Xin
    Liu, Zhenxiang
    Xing, Zengshu
    PLOS ONE, 2022, 17 (06):