Studying dynamics by magic-angle spinning solid-state NMR spectroscopy: Principles and applications to biomolecules

被引:170
作者
Schanda, Paul [1 ,2 ,3 ]
Ernst, Matthias [4 ]
机构
[1] CEA, IBS, F-38027 Grenoble, France
[2] CNRS, IBS, F-38027 Grenoble, France
[3] Univ Grenoble Alpes, IBS, F-38027 Grenoble, France
[4] ETH, Phys Chem, Vladimir Prelog Weg 2, CH-8093 Zurich, Switzerland
基金
欧洲研究理事会; 瑞士国家科学基金会;
关键词
Dynamics; Dipolar couplings; Spin relaxation; Magic-angle-spinning; Protein; NUCLEAR-MAGNETIC-RESONANCE; PROTEIN-STRUCTURE DETERMINATION; CONFORMATIONAL-EXCHANGE PROCESSES; MULTIPLE-QUANTUM RELAXATION; CROSS-CORRELATED RELAXATION; CENTERBAND-ONLY DETECTION; MODEL-FREE APPROACH; CHEMICAL-SHIFT; BACKBONE DYNAMICS; HIGH-RESOLUTION;
D O I
10.1016/j.pnmrs.2016.02.001
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Magic-angle spinning solid-state NMR spectroscopy is an important technique to study molecular structure, dynamics and interactions, and is rapidly gaining importance in biomolecular sciences. Here we provide an overview of experimental approaches to study molecular dynamics by MAS solid-state NMR, with an emphasis on the underlying theoretical concepts and differences of MAS solid-state NMR compared to solution-state NMR. The theoretical foundations of nuclear spin relaxation are revisited, focusing on the particularities of spin relaxation in solid samples under magic-angle spinning. We discuss the range of validity of Redfield theory, as well as the inherent multi-exponential behavior of relaxation in solids. Experimental challenges for measuring relaxation parameters in MAS solid-state NMR and a few recently proposed relaxation approaches are discussed, which provide information about time scales and amplitudes of motions ranging from picoseconds to milliseconds. We also discuss the theoretical basis and experimental measurements of anisotropic interactions (chemical-shift anisotropies, dipolar and quadrupolar couplings), which give direct information about the amplitude of motions. The potential of combining relaxation data with such measurements of dynamically-averaged anisotropic interactions is discussed. Although the focus of this review is on the theoretical foundations of dynamics studies rather than their application, we close by discussing a small number of recent dynamics studies, where the dynamic properties of proteins in crystals are compared to those in solution. (C) 2016 Elsevier B.V. All rights reserved.
引用
收藏
页码:1 / 46
页数:46
相关论文
共 194 条
  • [71] Microsecond Time Scale Mobility in a Solid Protein As Studied by the 15N R1ρ Site-Specific NMR Relaxation Rates
    Krushelnitsky, Alexey
    Zinkevich, Tatiana
    Reichert, Detlef
    Chevelkov, Veniamin
    Reif, Bernd
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2010, 132 (34) : 11850 - 11853
  • [72] Direct Observation of Millisecond to Second Motions in Proteins by Dipolar CODEX NMR Spectroscopy
    Krushelnitsky, Alexey
    deAzevedo, Eduardo
    Linser, Rasmus
    Reif, Bernd
    Saalwaechter, Kay
    Reichert, Detlef
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2009, 131 (34) : 12097 - +
  • [73] STOCHASTIC LIOUVILLE EQUATIONS
    KUBO, R
    [J]. JOURNAL OF MATHEMATICAL PHYSICS, 1963, 4 (02) : 174 - &
  • [74] Cross-correlations in NMR
    Kumar, A
    Grace, RCR
    Madhu, PK
    [J]. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY, 2000, 37 (03) : 191 - 319
  • [75] The nuclear magnetic resonance relaxation data analysis in solids: General R1/R1ρ equations and the model-free approach
    Kurbanov, Rauf
    Zinkevich, Tatjana
    Krushelnitsky, Alexey
    [J]. JOURNAL OF CHEMICAL PHYSICS, 2011, 135 (18)
  • [76] Unraveling the complexity of protein backbone dynamics with combined 13C and 15N solid-state NMR relaxation measurements
    Lamley, Jonathan M.
    Lougher, Matthew J.
    Sass, Hans Juergen
    Rogowski, Marco
    Grzesiek, Stephan
    Lewandowski, Jozef R.
    [J]. PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2015, 17 (34) : 21997 - 22008
  • [77] A Combined Solid-State NMR and MD Characterization of the Stability and Dynamics of the HET-s(218-289) Prion in its Amyloid Conformation
    Lange, Adam
    Gattin, Zrinka
    Van Melckebeke, Helene
    Wasmer, Christian
    Soragni, Alice
    van Gunsteren, Wilfred F.
    Meier, Beat H.
    [J]. CHEMBIOCHEM, 2009, 10 (10) : 1657 - 1665
  • [78] Levitt M.H., 2007, EMAGRES, DOI DOI 10.1002/9780470034590.EMRSTM0551
  • [79] LEVITT MH, 1988, ISRAEL J CHEM, V28, P271
  • [80] Site-Specific Measurement of Slow Motions in Proteins
    Lewandowski, Jozef R.
    Sass, Hans Juergen
    Grzesiek, Stephan
    Blackledge, Martin
    Emsley, Lyndon
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (42) : 16762 - 16765