Applications and Developments in Targeted Proteomics: From SRM to DIA/SWATH

被引：39
作者：
Aebersold, Ruedi
Bensimon, Ariel
Collins, Ben C.
Ludwig, Christina
Sabido, Eduard
机构：
来源：
PROTEOMICS | 2016年 / 16卷 / 15-16期
关键词：
TANDEM MASS-SPECTROMETRY;
D O I：
10.1002/pmic.201600203
中图分类号：
Q5 [生物化学];
学科分类号：
071010 ; 081704 ;
摘要：
引用
收藏
页码：2065 / 2067
页数：3
相关论文
共 13 条
[1]   Processing strategies and software solutions for data-independent acquisition in mass spectrometry [J].
Bilbao, Aivett ;
Varesio, Emmanuel ;
Luban, Jeremy ;
Strambio-De-Castillia, Caterina ;
Hopfgartner, Gerard ;
Mueller, Markus ;
Lisacek, Frederique .
PROTEOMICS, 2015, 15 (5-6) :964-980
[2]   Targeted Peptide Measurements in Biology and Medicine: Best Practices for Mass Spectrometry- based Assay Development Using a Fit- for- Purpose Approach [J].
Carr, Steven A. ;
Abbatiello, Susan E. ;
Ackermann, Bradley L. ;
Borchers, Christoph ;
Domon, Bruno ;
Deutsch, Eric W. ;
Grant, Russell P. ;
Hoofnagle, Andrew N. ;
Huettenhain, Ruth ;
Koomen, John M. ;
Liebler, Daniel C. ;
Liu, Tao ;
MacLean, Brendan ;
Mani, D. R. ;
Mansfield, Elizabeth ;
Neubert, Hendrik ;
Paulovich, Amanda G. ;
Reiter, Lukas ;
Vitek, Olga ;
Aebersold, Ruedi ;
Anderson, Leigh ;
Bethem, Robert ;
Blonder, Josip ;
Boja, Emily ;
Botelho, Julianne ;
Boyne, Michael ;
Bradshaw, Ralph A. ;
Burlingame, Alma L. ;
Chan, Daniel ;
Keshishian, Hasmik ;
Kuhn, Eric ;
Kinsinger, Christopher ;
Lee, Jerry S. H. ;
Lee, Sang-Won ;
Moritz, Robert ;
Oses-Prieto, Juan ;
Rifai, Nader ;
Ritchie, James ;
Rodriguez, Henry ;
Srinivas, Pothur R. ;
Townsend, R. Reid ;
Van Eyk, Jennifer ;
Whiteley, Gordon ;
Wiita, Arun ;
Weintraub, Susan .
MOLECULAR & CELLULAR PROTEOMICS, 2014, 13 (03) :907-917
[3]   MULTIPLEXED AND DATA-INDEPENDENT TANDEM MASS SPECTROMETRY FOR GLOBAL PROTEOME PROFILING [J].
Chapman, John D. ;
Goodlett, David R. ;
Masselon, Christophe D. .
MASS SPECTROMETRY REVIEWS, 2014, 33 (06) :452-470
[4]   Technical considerations for large-scale parallel reaction monitoring analysis [J].
Gallien, Sebastien ;
Bourmaud, Adele ;
Kim, Sang Yoon ;
Domon, Bruno .
JOURNAL OF PROTEOMICS, 2014, 100 :147-159
[5]   Mass Spectrometry Applied to Bottom-Up Proteomics: Entering the High-Throughput Era for Hypothesis Testing [J].
Gillet, Ludovic C. ;
Leitner, Alexander ;
Aebersold, Ruedi .
ANNUAL REVIEW OF ANALYTICAL CHEMISTRY, VOL 9, 2016, 9 :449-472
[6]   Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis [J].
Gillet, Ludovic C. ;
Navarro, Pedro ;
Tate, Stephen ;
Roest, Hannes ;
Selevsek, Nathalie ;
Reiter, Lukas ;
Bonner, Ron ;
Aebersold, Ruedi .
MOLECULAR & CELLULAR PROTEOMICS, 2012, 11 (06)
[7]   Selected reaction monitoring for quantitative proteomics: a tutorial [J].
Lange, Vinzenz ;
Picotti, Paola ;
Domon, Bruno ;
Aebersold, Ruedi .
MOLECULAR SYSTEMS BIOLOGY, 2008, 4 (1)
[8]  
Nature Methods, 2013, NAT METHODS, V10, P1
[9]   Mass spectrometry in high-throughput proteomics: ready for the big time [J].
Nilsson, Tommy ;
Mann, Matthias ;
Aebersold, Ruedi ;
Yates, John R., III ;
Bairoch, Amos ;
Bergeron, John J. M. .
NATURE METHODS, 2010, 7 (09) :681-685
[10]   Parallel Reaction Monitoring for High Resolution and High Mass Accuracy Quantitative, Targeted Proteomics [J].
Peterson, Amelia C. ;
Russell, Jason D. ;
Bailey, Derek J. ;
Westphall, Michael S. ;
Coon, Joshua J. .
MOLECULAR & CELLULAR PROTEOMICS, 2012, 11 (11) :1475-1488
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