Comparison of DNA Truncated Barcodes and Full-Barcodes for Species Identification

被引：0

作者：

Yu, Hong-Jie ^{[1
]}

You, Zhu-Hong ^{[1
]}

机构：

[1] Chinese Acad Sci, Hefei Inst Intelligent Machines, Intelligent Comp Lab, Hefei 230031, Anhui, Peoples R China

来源：

ADVANCED INTELLIGENT COMPUTING THEORIES AND APPLICATIONS: WITH ASPECTS OF ARTIFICIAL INTELLIGENCE | 2010年 / 6216卷

关键词：

Cytochrome c oxidase I (COI); DNA degradation; truncated DNA barcodes; species identification; trade-off;

D O I：

暂无

中图分类号：

TP18 [人工智能理论];

学科分类号：

081104 ; 0812 ; 0835 ; 1405 ;

摘要：

Because of DNA degradation on some special occasion, it's necessary to compress the length of DNA barcodes, so that we could identify species more efficiently. In this study, we analyze the accordance of some attributes between the truncated DNA barcode sequences and the full length DNA barcodes sequences for birds. Our comparative analysis provides an approach that both middle-barcodes and mini-barcodes could be used to discriminate among species. Although the accuracy of truncated barcodes is lower than the full length DNA barcodes, there is a trade-off between efficiency and accuracy for truncated barcodes when they are used for species identification.

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收藏

页码：108 / 114

页数：7

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