Novel CH1:CL interfaces that enhance correct light chain pairing in heterodimeric bispecific antibodies

被引:29
作者
Boenisch, Maximilian [1 ,2 ]
Sellmann, Carolin [3 ,5 ]
Maresch, Daniel [4 ]
Halbig, Claudia [1 ]
Becker, Stefan [2 ,5 ]
Toleikis, Lars [5 ]
Hock, Bjoern [5 ]
Rueker, Florian [1 ,2 ]
机构
[1] BOKU Univ Nat Resources & Life Sci, Dept Chem, Christian Doppler Lab Antibody Engn, Muthgasse 18, A-1190 Vienna, Austria
[2] BOKU Univ Nat Resources & Life Sci, Dept Biotechnol, Muthgasse 18, A-1190 Vienna, Austria
[3] Tech Univ Darmstadt, Inst Organ Chem & Biochem, Alarich Weiss Str 4, D-64287 Darmstadt, Germany
[4] BOKU Univ Nat Resources & Life Sci, Dept Chem, Muthgasse 18, A-1190 Vienna, Austria
[5] Merck KGaA, Prot Engn & Antibody Technol, Frankfurter Str 250, D-64293 Darmstadt, Germany
基金
奥地利科学基金会;
关键词
bispecific antibodies; Fab interface design; heterodimeric IgG; light chain pairing problem; orthogonal Fab engineering; IGG ANTIBODIES; MONOCLONAL-ANTIBODIES; STRUCTURE VALIDATION; BINDING SITES; FC; PROTEINS; DESIGN; CELLS; INFORMATION; GENERATION;
D O I
10.1093/protein/gzx044
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Targeting two unique antigens with a single bispecific antibody is an attractive approach with potential broad therapeutic applicability. However, the production of heterodimeric bispecific antibodies (bsAbs) presents a challenge, requiring the co-expression and accurate pairing of two distinct heavy and light chain units. Several undesirable by-products can be formed in the production process, including heavy chain homodimers and non-cognate light chain pairings. Although additional downstream purification methods exist, they are often time consuming and restrict practical large-scale production. In this study, we identify and validate novel Fab interface mutations that increase cognate light chain pairing efficiencies within heterodimeric bsAbs. Importantly, the variable domains remain unaltered as interface mutations were restricted to the C(H)1 and C-L domains. We performed several biochemical assays to demonstrate that the novel engineered interfaces do not adversely impact bispecific antibody expression, stability, affinity and biological function. The designs reported here can easily be applied in a generic manner to use existing antibodies as building blocks for bsAbs which will help to accelerate the identification and production of next generation bispecific antibody therapeutics.
引用
收藏
页码:685 / 696
页数:12
相关论文
共 37 条
[1]   The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling [J].
Arnold, K ;
Bordoli, L ;
Kopp, J ;
Schwede, T .
BIOINFORMATICS, 2006, 22 (02) :195-201
[2]   Stable heterodimers from remodeling the domain interface of a homodimer using a phage display library [J].
Atwell, S ;
Ridgway, JBB ;
Wells, JA ;
Carter, P .
JOURNAL OF MOLECULAR BIOLOGY, 1997, 270 (01) :26-35
[3]   Toward the estimation of the absolute quality of individual protein structure models [J].
Benkert, Pascal ;
Biasini, Marco ;
Schwede, Torsten .
BIOINFORMATICS, 2011, 27 (03) :343-350
[4]   SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information [J].
Biasini, Marco ;
Bienert, Stefan ;
Waterhouse, Andrew ;
Arnold, Konstantin ;
Studer, Gabriel ;
Schmidt, Tobias ;
Kiefer, Florian ;
Cassarino, Tiziano Gallo ;
Bertoni, Martino ;
Bordoli, Lorenza ;
Schwede, Torsten .
NUCLEIC ACIDS RESEARCH, 2014, 42 (W1) :W252-W258
[5]  
Brezinschek HP, 1998, J IMMUNOL, V160, P4762
[6]   The making of bispecific antibodies [J].
Brinkmann, Ulrich ;
Kontermann, Roland E. .
MABS, 2017, 9 (02) :182-212
[7]   MolProbity: all-atom structure validation for macromolecular crystallography [J].
Chen, Vincent B. ;
Arendall, W. Bryan, III ;
Headd, Jeffrey J. ;
Keedy, Daniel A. ;
Immormino, Robert M. ;
Kapral, Gary J. ;
Murray, Laura W. ;
Richardson, Jane S. ;
Richardson, David C. .
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 :12-21
[8]   MolProbity: all-atom contacts and structure validation for proteins and nucleic acids [J].
Davis, Ian W. ;
Leaver-Fay, Andrew ;
Chen, Vincent B. ;
Block, Jeremy N. ;
Kapral, Gary J. ;
Wang, Xueyi ;
Murray, Laura W. ;
Arendall, W. Bryan, III ;
Snoeyink, Jack ;
Richardson, Jane S. ;
Richardson, David C. .
NUCLEIC ACIDS RESEARCH, 2007, 35 :W375-W383
[9]   SEEDbodies: fusion proteins based on strand-exchange engineered domain (SEED) CH3 heterodimers in an Fc analogue platform for asymmetric binders or immunofusions and bispecific antibodies [J].
Davis, Jonathan H. ;
Aperlo, Christel ;
Li, Yue ;
Kurosawa, Emmi ;
Lan, Yan ;
Lo, Kin-Ming ;
Huston, James S. .
PROTEIN ENGINEERING DESIGN & SELECTION, 2010, 23 (04) :195-202
[10]   Efficient production of bispecific IgG of different isotypes and species of origin in single mammalian cells [J].
Dillon, Michael ;
Yin, Yiyuan ;
Zhou, Jianhui ;
McCarty, Luke ;
Ellerman, Diego ;
Slaga, Dionysos ;
Junttila, Teemu T. ;
Han, Guanghui ;
Sandoval, Wendy ;
Ovacik, Meric A. ;
Lin, Kedan ;
Hu, Zhilan ;
Shen, Amy ;
Corn, Jacob E. ;
Spiess, Christoph ;
Carter, Paul J. .
MABS, 2017, 9 (02) :213-230