Development of a novel necroptosis-associated miRNA risk signature to evaluate the prognosis of colon cancer patients

被引:16
作者
Huang, Yang [1 ]
Zou, Yuanyuan [1 ]
Xiong, Qiru [1 ]
Zhang, Chao [2 ]
Maria Sayagues, Jose [3 ,4 ]
Shelat, Vishal G. [5 ]
Wang, Xingyu [6 ]
机构
[1] Anhui Med Univ, Gen Surg Dept, Affiliated Hosp 2, 678 Feicui Rd, Hefei 230601, Peoples R China
[2] Anhui Med Univ, Gen Surg Dept, Affiliated Hosp 1, Hefei, Peoples R China
[3] Univ Salamanca, Serv Anat Patol, Hosp Clin Univ Salamanca, Salamanca, Spain
[4] Univ Salamanca, Inst Invest Biomed Salamanca IBSAL, Salamanca, Spain
[5] Tan Tock Seng Hosp, Dept Gen Surg, Singapore, Singapore
[6] Anhui Med Univ, Affiliated Hosp 1, Emergency Surg Dept, Hefei, Peoples R China
关键词
Colon cancer; necroptosis-related miRNAs; prognosis; prognostic model; COLORECTAL-CANCER; TUMOR-SUPPRESSOR; EXPRESSION; MECHANISMS; MIR-148A; NECROSIS; PATHWAY; DEATH; CELLS;
D O I
10.21037/atm-21-6576
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Necroptosis is a recently discovered caspase-independent form of cell death which plays an important role in the occurrence and development of cancer. As an important regulatory factor in necroptosis, microRNAs (miRNAs) are important for the development of colon cancer. This study established a novel necroptosis-related miRNA risk signature to evaluate the prognosis of patients with colon adenocarcinoma (COAD). Methods: The necroptosis-related miRNAs were selected by assessing the differential expression of miRNAs in 459 COAD patient samples and 8 control samples from The Cancer Genome Atlas (TCGA). Selection operator Cox analyses and survival analyses were used to establish the risk signature of 7 miRNAs related to necroptosis. Functional enrichment analysis and nomograms were used to explore the potential effects of necroptosis-related miRNAs on prognosis and metastasis. The target genes of the necroptosisrelated miRNAs were predicted using online databases and the genes related to overall survival (OS) were screened. Results: The risk signature was based on 7 necroptosis-related miRNAs. Nomograms showed that the risk signature was effective at predicting the prognosis and TNM stage of COAD patients. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses demonstrated that these miRNAs play an important role in cancer development, metastasis, and prognosis. A total of 38 target genes for these miRNAs were found to be associated with the OS in COAD patients. Conclusions: This study provided novel evidence that necroptosis-related miRNAs are associated with the prognosis of COAD patients. A risk signature established based on these miRNAs could effectively predict the prognosis and metastasis of COAD in patients.
引用
收藏
页数:18
相关论文
共 50 条
[1]   Necroptosis in pancreatic cancer promotes cancer cell migration and invasion by release of CXCL5 [J].
Ando, Yohei ;
Ohuchida, Kenoki ;
Otsubo, Yoshiki ;
Kibe, Shin ;
Takesue, Shin ;
Abe, Toshiya ;
Iwamoto, Chika ;
Shindo, Koji ;
Moriyama, Taiki ;
Nakata, Kohei ;
Miyasaka, Yoshihiro ;
Ohtsuka, Takao ;
Oda, Yoshinao ;
Nakamura, Masafumi .
PLOS ONE, 2020, 15 (01)
[2]  
Cai SW, 2018, INT J CLIN EXP PATHO, V11, P5647
[3]   Human microRNA genes are frequently located at fragile sites and genomic regions involved in cancers [J].
Calin, GA ;
Sevignani, C ;
Dan Dumitru, C ;
Hyslop, T ;
Noch, E ;
Yendamuri, S ;
Shimizu, M ;
Rattan, S ;
Bullrich, F ;
Negrini, M ;
Croce, CM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (09) :2999-3004
[4]   Expression of Hippo pathway genes and their clinical significance in colon adenocarcinoma [J].
Cho, Sang Yeon ;
Gwak, Jang Wook ;
Shin, Yoo Chul ;
Moon, Daeju ;
Ahn, Jihyuok ;
Sol, Hyon Woo ;
Kim, Sungha ;
Kim, Gwanghun ;
Shin, Hyun Mu ;
Lee, Kyung Ha ;
Kim, Ji Yeon ;
Kim, Jin Soo .
ONCOLOGY LETTERS, 2018, 15 (04) :4926-4936
[5]   Necroptosis: Mechanisms and Relevance to Disease [J].
Galluzzi, Lorenzo ;
Kepp, Oliver ;
Chan, Francis Ka-Ming ;
Kroemer, Guido .
ANNUAL REVIEW OF PATHOLOGY: MECHANISMS OF DISEASE, VOL 12, 2017, 12 :103-130
[6]   Necroptosis: A Specialized Pathway of Programmed Necrosis [J].
Galluzzi, Lorenzo ;
Kroemer, Guido .
CELL, 2008, 135 (07) :1161-1163
[7]   miR-425-5p improves inflammation and septic liver damage through negatively regulating the RIP1-mediated necroptosis [J].
Gu, Changwei ;
Hou, Chongzhi ;
Zhang, Sheng .
INFLAMMATION RESEARCH, 2020, 69 (03) :299-308
[8]   Gender-Dependent Expression of Leading and Passenger Strand of miR-21 and miR-16 in Human Colorectal Cancer and Adjacent Colonic Tissues [J].
Hasakova, K. ;
Bezakova, J. ;
Vician, M. ;
Reis, R. ;
Zeman, M. ;
Herichova, I. .
PHYSIOLOGICAL RESEARCH, 2017, 66 :S575-S582
[9]   PI3K mediates tumor necrosis factor induced-necroptosis through initiating RIP1-RIP3-MLKL signaling pathway activation [J].
Hu, Shiping ;
Chang, Xixi ;
Zhu, Hongbin ;
Wang, Dongxu ;
Chen, Guozhu .
CYTOKINE, 2020, 129
[10]   Necroptosis of tumor cells leads to tumor necrosis and promotes tumor metastasis [J].
Jiao, Delong ;
Cai, Zhenyu ;
Choksi, Swati ;
Ma, Dan ;
Choe, Moran ;
Kwon, Hyung-Joon ;
Baik, Jin Young ;
Rowan, Brian G. ;
Liu, Chengyu ;
Liu, Zheng-gang .
CELL RESEARCH, 2018, 28 (08) :868-870