Nitrogen Cycling in Rice Paddy Environments: Past Achievements and Future Challenges

被引:195
作者
Ishii, Satoshi [1 ]
Ikeda, Seishi [2 ]
Minamisawa, Kiwamu [3 ]
Senoo, Keishi [4 ]
机构
[1] Hokkaido Univ, Div Environm Engn, Sapporo, Hokkaido, Japan
[2] Natl Agr & Food Res Org, Hokkaido Agr Res Ctr, Upland Farming Res Div, Memuro, Hokkaido, Japan
[3] Tohoku Univ, Grad Sch Life Sci, Sendai, Miyagi 980, Japan
[4] Univ Tokyo, Grad Sch Agr & Life Sci, Dept Appl Biol Chem, Tokyo, Japan
关键词
nitrogen cycling; nitrification; denitrification; nitrogen fixation; rice paddy soil; AMMONIA-OXIDIZING BACTERIA; DENITRIFICATION-INDUCING CONDITIONS; ANAEROBIC METHANE OXIDATION; NITRIFICATION-DENITRIFICATION; NITRITE REDUCTASE; ANAMMOX BACTERIA; FLOODED SOILS; DISSIMILATORY REDUCTION; DENITRIFYING BACTERIA; MICROBIAL COMMUNITY;
D O I
10.1264/jsme2.ME11293
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Nitrogen is generally the most limiting nutrient for rice production. In rice paddy soils, various biochemical processes can occur regarding N cycling, including nitrification, denitrification, and nitrogen fixation. Since its discovery in the 1930s, the nitrification-denitrification process has been extensively studied in Japan. It may cause N loss from rice paddy soils, while it can also reduce environmental pollutions such as nitrate leaching and emission of nitrous oxide (N2O). In this review article, we first summarize the early and important findings regarding nitrification-denitrification in rice paddy soils, and then update recent findings regarding key players in denitrification and N2O reduction. In addition, we also discuss the potential occurrence of other newly found reactions in the N cycle, such as archaeal ammonia oxidization, fungal denitrification, anaerobic methane oxidation coupled with denitrification, and anaerobic ammonium oxidation.
引用
收藏
页码:282 / 292
页数:11
相关论文
共 160 条
[1]   Archaeal ammonia oxidizers and nirS-type denitrifiers dominate sediment nitrifying and denitrifying populations in a subtropical macrotidal estuary [J].
Abell, Guy C. J. ;
Revill, Andrew T. ;
Smith, Craig ;
Bissett, Andrew P. ;
Volkman, John K. ;
Robert, Stanley S. .
ISME JOURNAL, 2010, 4 (02) :286-300
[2]  
Adhya TK, 1996, BIOL FERT SOILS, V23, P321
[3]   Estimations of emission factors for fertilizer-induced direct N2O emissions from agricultural soils in Japan:: Summary of available data [J].
Akiyama, Hiroko ;
Yan, Xiaoyuan ;
Yagi, Kazuyuki .
SOIL SCIENCE AND PLANT NUTRITION, 2006, 52 (06) :774-787
[4]   Automated sampling system for long-term monitoring of nitrous oxide and methane fluxes from soils [J].
Akiyama, Hiroko ;
Hayakawa, Atsushi ;
Sudo, Shigeto ;
Yonemura, Seiichiro ;
Tanonaka, Takeshi ;
Yagi, Kazuyuki .
SOIL SCIENCE AND PLANT NUTRITION, 2009, 55 (03) :435-440
[5]   Detection of anammox activity and diversity of anammox bacteria-related 16S rRNA genes in coastal marine sediment in japan [J].
Amano, Teruki ;
Yoshinaga, Ikuo ;
Okada, Kentaro ;
Yamagishi, Takao ;
Ueda, Shingo ;
Obuchi, Akira ;
Sako, Yoshihiko ;
Suwa, Yuichi .
MICROBES AND ENVIRONMENTS, 2007, 22 (03) :232-242
[6]   Contribution of Anammox Bacteria to Benthic Nitrogen Cycling in a Mangrove Forest and Shrimp Ponds, Haiphong, Vietnam [J].
Amano, Teruki ;
Yoshinaga, Ikuo ;
Yamagishi, Takao ;
Chu Van Thuoc ;
Pham The Thu ;
Ueda, Shingo ;
Kato, Kenji ;
Sako, Yoshihiko ;
Suwa, Yuichi .
MICROBES AND ENVIRONMENTS, 2011, 26 (01) :1-6
[7]   Seasonal Changes in Abundance of Ammonia-Oxidizing Archaea and Ammonia-Oxidizing Bacteria and Their Nitrification in Sand of an Eelgrass Zone [J].
Ando, Yoshifumi ;
Nakagawa, Tatsunori ;
Takahashi, Reiji ;
Yoshihara, Kiyoshi ;
Tokuyama, Tatsuaki .
MICROBES AND ENVIRONMENTS, 2009, 24 (01) :21-27
[8]   Denitrification coupled to nitrification in the rhizosphere of rice [J].
Arth, I ;
Frenzel, P ;
Conrad, R .
SOIL BIOLOGY & BIOCHEMISTRY, 1998, 30 (04) :509-515
[9]   Isolation of functional single cells from environments using a micromanipulator: application to study denitrifying bacteria [J].
Ashida, Naoaki ;
Ishii, Satoshi ;
Hayano, Sadakazu ;
Tago, Kanako ;
Tsuji, Takashi ;
Yoshimura, Yoshitaka ;
Otsuka, Shigeto ;
Senoo, Keishi .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2010, 85 (04) :1211-1217
[10]   Molecular analysis of the ammonia oxidizing bacterial community in the surface soil layer of a Japanese paddy field [J].
Bowatte, Saman ;
Jia, Zhongjun ;
Ishihara, Rie ;
Nakajima, Yasunori ;
Asakawa, Susumu ;
Kimura, Makoto .
SOIL SCIENCE AND PLANT NUTRITION, 2006, 52 (04) :427-431