Self-catalyzed growth of S layers via an amorphous-to-crystalline transition limited by folding kinetics

被引:142
作者
Chung, Sungwook [1 ,2 ]
Shin, Seong-Ho [1 ,3 ,4 ]
Bertozzi, Carolyn R. [1 ,3 ,4 ]
De Yoreo, James J. [1 ,3 ]
机构
[1] Univ Calif Berkeley, Lawrence Berkeley Lab, Mol Foundry, Berkeley, CA 94720 USA
[2] Univ Calif Berkeley, Lawrence Berkeley Lab, Phys Biosci Div, Berkeley, CA 94720 USA
[3] Univ Calif Berkeley, Lawrence Berkeley Lab, Div Mat Sci, Berkeley, CA 94720 USA
[4] Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
关键词
in situ atomic force microscopy imaging; protein crystal growth; two-step crystallization; amorphous precursors; assembly kinetics; ATOMIC-FORCE-MICROSCOPY; BACILLUS-SPHAERICUS; PROTEIN; PHASE; RECRYSTALLIZATION; NUCLEATION; BILAYERS; ARRAYS; SBPA;
D O I
10.1073/pnas.1008280107
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The importance of nonclassical, multistage crystallization pathways is increasingly evident from theoretical studies on colloidal systems and experimental investigations of proteins and biomineral phases. Although theoretical predictions suggest that proteins follow these pathways as a result of fluctuations that create unstable dense-liquid states, microscopic studies indicate these states are long-lived. Using in situ atomic force microscopy to follow 2D assembly of S-layer proteins on supported lipid bilayers, we have obtained a molecular-scale picture of multistage protein crystallization that reveals the importance of conformational transformations in directing the pathway of assembly. We find that monomers with an extended conformation first form a mobile adsorbed phase, from which they condense into amorphous clusters. These clusters undergo a phase transition through S-layer folding into crystalline clusters composed of compact tetramers. Growth then proceeds by formation of new tetramers exclusively at cluster edges, implying tetramer formation is autocatalytic. Analysis of the growth kinetics leads to a quantitative model in which tetramer creation is rate limiting. However, the estimated barrier is much smaller than expected for folding of isolated S-layer proteins, suggesting an energetic rationale for this multistage pathway.
引用
收藏
页码:16536 / 16541
页数:6
相关论文
共 34 条
  • [1] Prion-like transmission of protein aggregates in neurodegenerative diseases
    Brundin, Patrik
    Melki, Ronald
    Kopito, Ron
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2010, 11 (04) : 301 - 307
  • [2] Investigation of the crystallization process in 2 nm CdSe quantum dots
    Chen, XB
    Samia, ACS
    Lou, YB
    Burda, C
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (12) : 4372 - 4375
  • [3] Amyloids: Not only pathological agents but also ordered nanomaterials
    Cherny, Izhack
    Gazit, Ehud
    [J]. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2008, 47 (22) : 4062 - 4069
  • [4] Supramolecular assembly of amelogenin nanospheres into birefringent microribbons
    Du, C
    Falini, G
    Fermani, S
    Abbott, C
    Moradian-Oldak, J
    [J]. SCIENCE, 2005, 307 (5714) : 1450 - 1454
  • [5] Are S-layers exoskeletons? The basic function of protein surface layers revisited
    Engelhardt, Harald
    [J]. JOURNAL OF STRUCTURAL BIOLOGY, 2007, 160 (02) : 115 - 124
  • [6] Liquid-liquid separation in solutions of normal and sickle cell hemoglobin
    Galkin, O
    Chen, K
    Nagel, RL
    Hirsch, RE
    Vekilov, PG
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (13) : 8479 - 8483
  • [7] Stable Prenucleation Calcium Carbonate Clusters
    Gebauer, Denis
    Voelkel, Antje
    Coelfen, Helmut
    [J]. SCIENCE, 2008, 322 (5909) : 1819 - 1822
  • [8] Lateral diffusion of lipids in silane-, dextran-, and S-layer-supported mono- and bilayers
    Györvary, E
    Wetzer, B
    Sleytr, UB
    Sinner, A
    Offenhäusser, A
    Knoll, W
    [J]. LANGMUIR, 1999, 15 (04) : 1337 - 1347
  • [9] Self-assembly and recrystallization of bacterial S-layer proteins at silicon supports imaged in real time by atomic force microscopy
    Györvary, ES
    Stein, O
    Pum, D
    Sleytr, UB
    [J]. JOURNAL OF MICROSCOPY-OXFORD, 2003, 212 : 300 - 306
  • [10] EXPANSION OF THE TETRAGONALLY ARRAYED CELL-WALL PROTEIN LAYER DURING GROWTH OF BACILLUS-SPHAERICUS
    HOWARD, LV
    DALTON, DD
    MCCOUBREY, WK
    [J]. JOURNAL OF BACTERIOLOGY, 1982, 149 (02) : 748 - 757