Identification of diverse circular single-stranded DNA viruses in adult dragonflies and damselflies (Insecta: Odonata) of Arizona and Oklahoma, USA

被引:61
作者
Dayaram, Anisha [1 ,2 ]
Potter, Kristen A. [3 ]
Pailes, Roberta
Marinov, Milen [4 ]
Rosenstein, Dana D. [5 ]
Varsani, Arvind [1 ,2 ,6 ,7 ,8 ]
机构
[1] Univ Canterbury, Sch Biol Sci, Christchurch 8140, New Zealand
[2] Univ Canterbury, Biomol Interact Ctr, Christchurch 8140, New Zealand
[3] No Arizona Univ, Sch Earth Sci & Environm Sustainabil, Flagstaff, AZ 86011 USA
[4] Minist Primary Ind, Plant Hlth & Environm Lab, Invest & Diagnost Ctr & Response, Christchurch, New Zealand
[5] Univ Arizona, Sch Anthropol, Tucson, AZ 85721 USA
[6] Univ Cape Town, Dept Clin Lab Sci, Div Med Biochem, ZA-7700 Observatory, South Africa
[7] Univ Florida, Dept Plant Pathol, Gainesville, FL 32611 USA
[8] Univ Florida, Emerging Pathogens Inst, Gainesville, FL 32611 USA
基金
新加坡国家研究基金会;
关键词
ssDNA viruses; Odonata; Replication-associated protein; SsHADV-1; Sclerotinia sclerotiorum; MOLECULAR CHARACTERIZATION; SCLEROTINIA-SCLEROTIORUM; DISCOVERY; CYCLOVIRUS; BINDING; ORIGIN; HYPOVIRULENCE; ALIGNMENT; SAMPLES; REP;
D O I
10.1016/j.meegid.2014.12.037
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
Next generation sequencing and metagenomic approaches are commonly used for the identification of circular replication associated protein (Rep)-encoding single stranded (CRESS) DNA viruses circulating in various environments. These approaches have enabled the discovery of some CRESS DNA viruses associated with insects. In this study we identified and recovered 31 viral genomes which represent 24 distinct CRESS DNA viruses from seven dragonfly species (Rhionaeschna multicolor, Erythemis simplicicollis, Erythrodiplax fusca, Libellula quadrimaculata, Libellula saturata, Pachydiplax longipennis, and Pantala hymenaea) and two damselfly species (Ischnura posita, Ischnura ramburii) sampled in various locations in the states of Arizona and Oklahoma of the United States of America (USA). We also identified Sclerotinia sclerotiorum hypovirulence-associated DNA virus-1 (S5HADV-1) in P. hymenaea, E. simplicicollis and I. ramburii sampled in Oklahoma, which is the first report of S5HADV-1 in the New World. The genome architectures of the CRESS DNA viruses recovered vary, but they all have at least two major open reading frames (ORFs) that have either a bidirectional or unidirectional arrangement. Four of the viral genomes recovered, in addition to the three isolates of S5HADV-1, show similarities to viruses of the proposed gemycircularvirus group. Analysis of the Rep encoded by the remaining 24 viral genomes reveals that these are highly diverse and allude to the fact that they represent novel CRESS DNA viruses. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:278 / 287
页数:10
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