Minimizing side reactions during amide formation using DIC and oxymapure in solid-phase peptide synthesis

被引:11
作者
Manne, Srinivasa Rao [1 ]
El-Faham, Ayman [2 ]
de la Torre, Beatriz G. [3 ]
Albericio, Fernando [1 ,4 ,5 ,6 ]
机构
[1] Univ KwaZulu Natal, Sch Chem & Phys, Peptide Sci Lab, ZA-4001 Durban, South Africa
[2] Alexandria Univ, Fac Sci, Dept Chem, Alexandria 21321, Egypt
[3] Univ KwaZulu Natal, Coll Hlth Sci, Sch Lab Med & Med Sci, KwaZulu Natal Res Innovat & Sequencing Platform K, ZA-4041 Durban, South Africa
[4] CSIC, Inst Adv Chem Catalonia IQAC, Barcelona 08034, Spain
[5] Univ Barcelona, Networking Ctr Bioengn Biomat & Nanomed, CIBER BBN, Barcelona 08028, Spain
[6] Univ Barcelona, Dept Organ Chem, Barcelona 08028, Spain
基金
新加坡国家研究基金会;
关键词
Solid-phase peptide synthesis; Side-reaction; HCN formation; Oxadiazole; Carbodiimides; MEDICINAL CHEMISTS;
D O I
10.1016/j.tetlet.2021.153462
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
N,N'-diisopropylcarbodiimide (DIC) and OxymaPure are the reagents of choice for the formation of pep-tide bonds in Solid-Phase Peptide Synthesis (SPPS). The combined use of DIC and OxymaPure in model cases can be accompanied by a serious side reaction with the ultimate formation of oxadiazole and HCN. Here we demonstrate, in a practical case, that the first step of the reaction (formation of an adduct) takes place with approximately 1% respect to the amount of OxymaPure. Furthermore, we found that the second part of the side-reaction (formation of oxadiazole and HCN) can be minimized and even sup -pressed with an appropriate protocol for the sequence of reagent addition. Thus, the best conditions are preactivation of the Fmoc-amino acid with only DIC for 2-5 min followed by addition of the resulting mixture to the peptide-resin. OxymaPure can be added to the resin before adding the preactivation mix -ture or after first adding the preactivation mixture, the latter approach giving the best results. Ultimately, in standard research conditions, the combined use of DIC and OxymaPure as coupling method in SPPS is safe. (c) 2021 Elsevier Ltd. All rights reserved.
引用
收藏
页数:5
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