Data assimilation;
ensemble Kalman filter;
ensemble;
multi run simulations;
elastic;
fault tolerant;
online;
in transit processing;
master;
worker;
LAND-SURFACE;
IMPLEMENTATION;
PARALLEL;
D O I:
10.1177/10943420221110507
中图分类号:
TP3 [计算技术、计算机技术];
学科分类号:
0812 ;
摘要:
Prediction of chaotic systems relies on a floating fusion of sensor data (observations) with a numerical model to decide on a good system trajectory and to compensate non-linear feedback effects. Ensemble-based data assimilation (DA) is a major method for this concern depending on propagating an ensemble of perturbed model realizations. In this paper, we develop an elastic, online, fault-tolerant and modular framework called Melissa-DA for large-scale ensemble-based DA. Melissa-DAallows elastic addition or removal of compute resources for state propagation at runtime. Dynamic load balancing based on list scheduling ensures efficient execution. Online processing of the data produced by ensemble members enables to avoid the I/O bottleneck of file-based approaches. Our implementation embeds the PDAF parallel DA engine, enabling the use of various DA methods. Melissa-DAcan support extra ensemble-based DA methods by implementing the transformation of member background states into analysis states. Experiments confirm the excellent scalability of Melissa-DA, propagating 16,384 members for a regional hydrological critical zone assimilation relying on the ParFlow model on a domain with about 4 M grid cells. The same use case was ported to the PDAF state-of-the-art DA framework relying on a MPI approach. A comparison with Melissa-DA at 2500 members on 20,000 cores shows our approach is about 50% faster per assimilation cycle.
机构:
Phenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
A&A Green Phoenix Grp JSC, Phenikaa Res & Technol Inst PRATI, 167 Hoang Ngan, Hanoi 11313, VietnamPhenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
Thanh Trinh
HoangAnh Le
论文数: 0引用数: 0
h-index: 0
机构:
Phenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
Phenikaa Univ, Informat Technol Ctr, Hanoi 12116, Vietnam
Phenikaa Univ, Phenikaa Inst Adv Study PIAS, Hanoi 12116, VietnamPhenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
HoangAnh Le
Nhung VuongThi
论文数: 0引用数: 0
h-index: 0
机构:
Vietnam Natl Univ, Hanoi Sch Business & Management, Hanoi 11310, VietnamPhenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
Nhung VuongThi
Hai HoangDuc
论文数: 0引用数: 0
h-index: 0
机构:
Phenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
Phenikaa Univ, Informat Technol Ctr, Hanoi 12116, VietnamPhenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
Hai HoangDuc
KieuAnh VuThi
论文数: 0引用数: 0
h-index: 0
机构:
Phenikaa Univ, Fac Comp Sci, Hanoi 12116, VietnamPhenikaa Univ, Fac Comp Sci, Hanoi 12116, Vietnam
机构:
SK Innovat, E&P Business Div, Seoul 03188, South KoreaSK Innovat, E&P Business Div, Seoul 03188, South Korea
Jung, Seungpil
Lee, Kyungbook
论文数: 0引用数: 0
h-index: 0
机构:
Korea Inst Geosci & Mineral Resources, Petr & Marine Res Div, Daejeon 34132, South KoreaSK Innovat, E&P Business Div, Seoul 03188, South Korea
Lee, Kyungbook
Park, Changhyup
论文数: 0引用数: 0
h-index: 0
机构:
Kangwon Natl Univ, Dept Energy & Resources Engn, Chunchon 24341, Kangwon, South KoreaSK Innovat, E&P Business Div, Seoul 03188, South Korea
Park, Changhyup
Choe, Jonggeun
论文数: 0引用数: 0
h-index: 0
机构:
Seoul Natl Univ, Res Inst Energy & Resources, Dept Energy Syst Engn, Seoul 08826, South KoreaSK Innovat, E&P Business Div, Seoul 03188, South Korea
机构:
Virginia Tech, Kevin T Crofton Dept Aerosp & Ocean Engn, Blacksburg, VA 24061 USAVirginia Tech, Kevin T Crofton Dept Aerosp & Ocean Engn, Blacksburg, VA 24061 USA
Strofer, Carlos A. Michelen
Zhang, Xin-Lei
论文数: 0引用数: 0
h-index: 0
机构:
Virginia Tech, Kevin T Crofton Dept Aerosp & Ocean Engn, Blacksburg, VA 24061 USAVirginia Tech, Kevin T Crofton Dept Aerosp & Ocean Engn, Blacksburg, VA 24061 USA
Zhang, Xin-Lei
Xiao, Heng
论文数: 0引用数: 0
h-index: 0
机构:
Virginia Tech, Kevin T Crofton Dept Aerosp & Ocean Engn, Blacksburg, VA 24061 USAVirginia Tech, Kevin T Crofton Dept Aerosp & Ocean Engn, Blacksburg, VA 24061 USA
机构:
Inst Atmospher Phys, LASG, Beijing, Peoples R China
Tsinghua Univ, Dept Earth Syst Sci, Minist Educ, Key Lab Earth Syst Modeling, Beijing, Peoples R China
Univ Chinese Acad Sci, Beijing, Peoples R ChinaInst Atmospher Phys, LASG, Beijing, Peoples R China
Wang, Bin
Liu, Juanjuan
论文数: 0引用数: 0
h-index: 0
机构:
Inst Atmospher Phys, LASG, Beijing, Peoples R China
Univ Chinese Acad Sci, Beijing, Peoples R ChinaInst Atmospher Phys, LASG, Beijing, Peoples R China
Liu, Juanjuan
Liu, Li
论文数: 0引用数: 0
h-index: 0
机构:
Tsinghua Univ, Dept Earth Syst Sci, Minist Educ, Key Lab Earth Syst Modeling, Beijing, Peoples R ChinaInst Atmospher Phys, LASG, Beijing, Peoples R China
Liu, Li
Xu, Shiming
论文数: 0引用数: 0
h-index: 0
机构:
Tsinghua Univ, Dept Earth Syst Sci, Minist Educ, Key Lab Earth Syst Modeling, Beijing, Peoples R ChinaInst Atmospher Phys, LASG, Beijing, Peoples R China
Xu, Shiming
Huang, Wenyu
论文数: 0引用数: 0
h-index: 0
机构:
Tsinghua Univ, Dept Earth Syst Sci, Minist Educ, Key Lab Earth Syst Modeling, Beijing, Peoples R ChinaInst Atmospher Phys, LASG, Beijing, Peoples R China
机构:
Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USAVirginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA
Constantinescu, Emil M.
Sandu, Adrian
论文数: 0引用数: 0
h-index: 0
机构:Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA
Sandu, Adrian
Chai, Tianfeng
论文数: 0引用数: 0
h-index: 0
机构:Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA
Chai, Tianfeng
Carmichael, Gregory R.
论文数: 0引用数: 0
h-index: 0
机构:Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA
机构:Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA
Constantinescu, Emil M.
Sandu, Adrian
论文数: 0引用数: 0
h-index: 0
机构:
Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USAVirginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA
Sandu, Adrian
Chai, Tianfeng
论文数: 0引用数: 0
h-index: 0
机构:Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA
Chai, Tianfeng
Carmichael, Gregory R.
论文数: 0引用数: 0
h-index: 0
机构:Virginia Polytech Inst & State Univ, Dept Comp Sci, Blacksburg, VA 24061 USA