NUCLEI SEGMENTATION OF FLUORESCENCE MICROSCOPY IMAGES BASED ON MIDPOINT ANALYSIS AND MARKED POINT PROCESS

被引：0

作者：

Gadgil, Neeraj J. ^{[1
]}

Salama, Paul ^{[2
]}

Dunn, Kenneth W. ^{[3
]}

Delp, Edward J. ^{[1
]}

机构：

[1] Purdue Univ, Sch Elect & Comp Engn, Video & Image Proc Lab, W Lafayette, IN 47907 USA

[2] Indiana Univ Purdue Univ, Dept Elect & Comp Engn, Indianapolis, IN 46202 USA

[3] Indiana Univ, Sch Med, Div Nephrol, Indianapolis, IN USA

来源：

2016 IEEE SOUTHWEST SYMPOSIUM ON IMAGE ANALYSIS AND INTERPRETATION (SSIAI) | 2016年

关键词：

biomedical image segmentation; marked point process; fluorescence microscopy; 2-PHOTON MICROSCOPY; EXTRACTION; ALGORITHM; DYNAMICS; KIDNEY; SPACES; MODEL;

D O I：

暂无

中图分类号：

TP18 [人工智能理论];

学科分类号：

081104 ; 0812 ; 0835 ; 1405 ;

摘要：

Microscope image analysis is challenging because of non-uniform brightness, decreasing image contrast with tissue depth, poor edge details and irregular and unknown structures. In this paper, we present a nuclei segmentation and counting method using midpoint analysis, shape-based function optimization and a MPP simulation with a spatial birth-death process. Preliminary results demonstrate efficacy of the proposed method.

引用

页码：37 / 40

页数：4

共 22 条

[1] Attributed Relational Graphs for Cell Nucleus Segmentation in Fluorescence Microscopy Images [J].

Arslan, Salim ;

Ersahin, Tulin ;

Cetin-Atalay, Rengul ;

Gunduz-Demir, Cigdem .

IEEE TRANSACTIONS ON MEDICAL IMAGING, 2013, 32 (06) :1121-1131

[2] Two-photon microscopy: Visualization of kidney dynamics [J].

Ashworth, S. L. ;

Sandoval, R. M. ;

Tanner, G. A. ;

Molitoris, B. A. .

KIDNEY INTERNATIONAL, 2007, 72 (04) :416-421

[3] Building Development Monitoring in Multitemporal Remotely Sensed Image Pairs with Stochastic Birth-Death Dynamics [J].

Benedek, Csaba ;

Descombes, Xavier ;

Zerubia, Josiane .

IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2012, 34 (01) :33-50

[4]

Bergeest J., 2014, P IEEE INT S BIOM IM, P637

[5] Segmentation of Clustered Nuclei With Shape Markers and Marking Function [J].

Cheng, Jierong ;

Rajapakse, Jagath C. .

IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2009, 56 (03) :741-748

[6]

Coulot L, 2006, I S BIOMED IMAGING, P566

[7] An object-based approach for detecting small brain lesions: Application to Virchow-Robin spaces [J].

Descombes, X ;

Kruggel, F ;

Wollny, G ;

Gertz, HJ .

IEEE TRANSACTIONS ON MEDICAL IMAGING, 2004, 23 (02) :246-255

[8] Object Extraction Using a Stochastic Birth-and-Death Dynamics in Continuum [J].

Descombes, Xavier ;

Minlos, Robert ;

Zhizhina, Elena .

JOURNAL OF MATHEMATICAL IMAGING AND VISION, 2009, 33 (03) :347-359

[9] Functional studies of the kidney of living animals using multicolor two-photon microscopy [J].

Dunn, KW ;

Sandoval, RM ;

Kelly, KJ ;

Dagher, PC ;

Tanner, GA ;

Atkinson, SJ ;

Bacallao, RL ;

Molitoris, BA .

AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY, 2002, 283 (03) :C905-C916

[10] Feature extraction of chromosomes from 3-D confocal microscope images [J].

Kyan, MJ ;

Guan, L ;

Arnison, MR ;

Cogswell, CJ .

IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2001, 48 (11) :1306-1318

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