Electrostatic interactions in biological DNA-related systems

被引:156
作者
Cherstvy, A. G. [1 ]
机构
[1] Forschungszentrum Julich, ICS 2, Inst Complex Syst, D-52425 Julich, Germany
关键词
NUCLEOSOME CORE PARTICLES; PROTEIN-PROTEIN INTERACTIONS; CHROMATIN FIBER STRUCTURE; CHLOROTIC MOTTLE VIRUS; REPRESSOR-OPERATOR INTERACTION; DIFFUSION-DRIVEN MECHANISMS; LIQUID-CRYSTALLINE PHASES; CATIONIC-LIPID COMPLEXES; POISSON-BOLTZMANN THEORY; LOCAL HEXAGONAL PACKING;
D O I
10.1039/c0cp02796k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this perspective article, we focus on recent developments in the theory of charge effects in biological DNA-related systems. The electrostatic effects on different levels of DNA organization are considered, including the DNA-DNA interactions, DNA complexation with cationic lipid membranes, DNA condensates and DNA-dense cholesteric phases, protein-DNA recognition, DNA wrapping in nucleosomes, and inter-nucleosomal interactions. For these systems, we develop a theoretical framework to describe the physical-chemical mechanisms of structure formation and anticipate some biological consequences. General biophysical principles of DNA compaction in chromatin fibers and DNA spooling inside viral capsids are discussed in the end, with emphasis on electrostatic aspects.
引用
收藏
页码:9942 / 9968
页数:27
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