Excited state evolution of DNA stacked adenines resolved at the CASPT2//CASSCF/Amber level: from the bright to the excimer state and back

被引:34
作者
Conti, Irene [1 ]
Nenov, Artur [1 ]
Hoefinger, Siegfried [2 ,3 ]
Altavilla, Salvatore Flavio [1 ]
Rivalta, Ivan [4 ]
Dumont, Elise [5 ]
Orlandi, Giorgio [1 ]
Garavelli, Marco [1 ,5 ]
机构
[1] Univ Bologna, Dipartimento Chim G Ciamician, I-40126 Bologna, Italy
[2] Vienna Univ Technol, Zentraler Informatikdienst, A-1040 Vienna, Austria
[3] Michigan Technol Univ, Dept Phys, Houghton, MI 49331 USA
[4] Univ Lyon, CNRS, Inst Chim Lyon, Ecole Normale Super Lyon, F-69364 Lyon 07, France
[5] Ecole Normale Super Lyon, Lab Chim, F-69364 Lyon, France
基金
欧洲研究理事会;
关键词
ULTRAFAST INTERNAL-CONVERSION; BASE-STACKING; NONRADIATIVE DECAY; ENERGY-TRANSFER; DEACTIVATION MECHANISMS; MOLECULAR-SPECTROSCOPY; CONICAL INTERSECTIONS; PERTURBATION-THEORY; ELECTRONIC STATES; DOUBLE HELICES;
D O I
10.1039/c4cp05546b
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Deactivation routes of bright pi pi* (La) and excimer charge transfer (CT) states have been mapped for two stacked quantum mechanical (CASPT2//CASSCF) adenines inside a solvated DNA double strand decamer (poly(dA).poly(dT)) described at the molecular mechanics level. Calculations show that one carbon (C-2) puckering is a common relaxation coordinate for both the L-a and CT paths. By mapping the lowest crossing regions between L-a and CT states, together with the paths connecting the two states, we conclude that at least one CT state can be easily accessible. The lowest-lying conical intersections between ground state (GS) and CT states have been fully characterized in a realistic DNA environment for the first time. We show that the path to reach this crossing region from the CT minima involves high barriers that are not consistent with experimental data lifetimes. Instead, the multiexponential decay recorded in DNA, including the longest (ca. 100 picoseconds) lifetime component detected in oligomeric single-and double-stranded systems, is compatible with both intra-monomer relaxation processes along the L-a deactivation path (involving small barriers) and the population of the excimer (CT) state that behaves as a trap. In the latter case, deactivation is feasible only going back to the L-a state by following its preferred decay coordinate.
引用
收藏
页码:7291 / 7302
页数:12
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