The Molecular Basis for Dual Fatty Acid Amide Hydrolase (FAAH)/Cyclooxygenase (COX) Inhibition

被引:29
作者
Palermo, Giulia [1 ,3 ]
Favia, Angelo D. [1 ,4 ]
Convertino, Marino [1 ,5 ]
De Vivo, Marco [1 ,2 ]
机构
[1] Ist Italiano Tecnol, Lab Mol Modeling & Drug Discovery, Via Morego 30, I-16163 Genoa, Italy
[2] Forschungszentrum Julich, Computat Biomed IAS INM 9 5, Wilhelm Johnen Str, D-52428 Julich, Germany
[3] Ecole Polytech Fed Lausanne, Inst Sci & Ingn Chim, CH-1015 Lausanne, Switzerland
[4] Eli Lilly & Co, LCRDC, Bldg 8,338 Jia Li Lue Rd, Shanghai 201203, Peoples R China
[5] Univ N Carolina, Dept Biochem & Biophys, Chapel Hill, NC USA
关键词
cyclooxygenase; drug design; fatty acid amide hydrolase; molecular dynamics; molecular modeling; multitarget ligands; ALPHA-KETOHETEROCYCLE INHIBITORS; CRYSTAL-STRUCTURE; ENZYME; FAAH; CYCLOOXYGENASE; DISCOVERY; BINDING; ELUCIDATION; SIMULATIONS; DERIVATIVES;
D O I
10.1002/cmdc.201500507
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
The design of multitarget-directed ligands is a promising strategy for discovering innovative drugs. Here, we report a mechanistic study that clarifies key aspects of the dual inhibition of the fatty acid amide hydrolase (FAAH) and the cyclooxygenase (COX) enzymes by a new multitarget-directed ligand named ARN2508 (2-[3-fluoro-4-[3-(hexylcarbamoyloxy)phenyl]phenyl]propanoic acid). This potent dual inhibitor combines, in a single scaffold, the pharmacophoric elements often needed to block FAAH and COX, that is, a carbamate moiety and the 2-arylpropionic acid functionality, respectively. Molecular modeling and molecular dynamics simulations suggest that ARN2508 uses a noncovalent mechanism of inhibition to block COXs, while inhibiting FAAH via the acetylation of the catalytic Ser241, in line with previous experimental evidence for covalent FAAH inhibition. This study proposes the molecular basis for the dual FAAH/COX inhibition by this novel hybrid scaffold, stimulating further experimental studies and offering new insights for the rational design of novel anti-inflammatory agents that simultaneously act on FAAH and COX.
引用
收藏
页码:1252 / 1258
页数:7
相关论文
共 46 条
[21]  
Lodola Alessio, 2013, Methods Mol Biol, V924, P67, DOI 10.1007/978-1-62703-017-5_4
[22]   The productive conformation of arachidonic acid bound to prostaglandin synthase [J].
Malkowski, MG ;
Ginell, SL ;
Smith, WL ;
Garavito, RM .
SCIENCE, 2000, 289 (5486) :1933-1937
[23]   Structure-guided inhibitor design for human FAAH by interspecies active site conversion [J].
Mileni, Mauro ;
Johnson, Douglas S. ;
Wang, Zhigang ;
Everdeen, Daniel S. ;
Liimatta, Marya ;
Pabst, Brandon ;
Bhattacharya, Keshab ;
Nugent, Richard A. ;
Kamtekar, Satwik ;
Cravatt, Benjamin F. ;
Ahn, Kay ;
Stevens, Raymond C. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (35) :12820-12824
[24]   Crystal Structure of Fatty Acid Amide Hydrolase Bound to the Carbamate Inhibitor URB597: Discovery of a Deacylating Water Molecule and Insight into Enzyme Inactivation [J].
Mileni, Mauro ;
Kamtekar, Satwik ;
Wood, David C. ;
Benson, Timothy E. ;
Cravatt, Benjamin F. ;
Stevens, Raymond C. .
JOURNAL OF MOLECULAR BIOLOGY, 2010, 400 (04) :743-754
[25]   X-ray Crystallographic Analysis of α-Ketoheterocycle Inhibitors Bound to a Humanized Variant of Fatty Acid Amide Hydrolase [J].
Mileni, Mauro ;
Garfunkle, Joie ;
Ezzili, Cyrine ;
Kimball, F. Scott ;
Cravatt, Benjamin F. ;
Stevens, Raymond C. ;
Boger, Dale L. .
JOURNAL OF MEDICINAL CHEMISTRY, 2010, 53 (01) :230-240
[26]   MMPBSA.py: An Efficient Program for End-State Free Energy Calculations [J].
Miller, Bill R., III ;
McGee, T. Dwight, Jr. ;
Swails, Jason M. ;
Homeyer, Nadine ;
Gohlke, Holger ;
Roitberg, Adrian E. .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2012, 8 (09) :3314-3321
[27]  
Næsdall J, 2006, DRUG SAFETY, V29, P119
[28]   Molecular Mechanism of Ruthenium and Gold Anticancer Agents in the Allosteric Regulation of the Histone Proteins of Chromatin [J].
Palermo, Giulia ;
Riedel, Tina ;
Davey, Curt Alexander ;
Dyson, Paul Joseph ;
Rothlisberger, Ursula .
BIOPHYSICAL JOURNAL, 2015, 108 (02) :59A-59A
[29]   An optimized polyamine moiety boosts the potency of human type II topoisomerase poisons as quantified by comparative analysis centered on the clinical candidate F14512 [J].
Palermo, Giulia ;
Minniti, Elirosa ;
Greco, Maria Laura ;
Riccardi, Laura ;
Simoni, Elena ;
Convertino, Marino ;
Marchetti, Chiara ;
Rosini, Michela ;
Sissi, Claudia ;
Minarini, Anna ;
De Vivo, Marco .
CHEMICAL COMMUNICATIONS, 2015, 51 (76) :14310-14313
[30]   Keys to Lipid Selection in Fatty Acid Amide Hydrolase Catalysis: Structural Flexibility, Gating Residues and Multiple Binding Pockets [J].
Palermo, Giulia ;
Bauer, Inga ;
Campomanes, Pablo ;
Cavalli, Andrea ;
Armirotti, Andrea ;
Girotto, Stefania ;
Rothlisberger, Ursula ;
De Vivo, Marco .
PLOS COMPUTATIONAL BIOLOGY, 2015, 11 (06)