Structures of Arthrobacter globiformis urate oxidase-ligand complexes

被引:25
|
作者
Juan, Ella Czarina Magat [1 ]
Hoque, Md Mominul [1 ]
Shimizu, Satoru [1 ]
Hossain, Md Tofazzal [1 ]
Yamamoto, Tamotsu [2 ]
Imamura, Shigeyuki [2 ]
Suzuki, Kaoru [3 ]
Tsunoda, Masaru [4 ]
Amano, Hitoshi [5 ]
Sekiguchi, Takeshi [3 ]
Takenaka, Akio [1 ,5 ]
机构
[1] Tokyo Inst Technol, Grad Sch Biosci & Biotechnol, Midori Ku, Kanagawa 2268501, Japan
[2] Asahi Kasei Pharma Corp, Mifu Ku, Izunokuni, Shizuoka 4102321, Japan
[3] Fukushima Natl Coll Technol, Iwaki, Fukushima 9708034, Japan
[4] Iwaki Meisei Univ, Coll Sci & Engn, Iwaki, Fukushima 9708551, Japan
[5] Iwaki Meisei Univ, Fac Pharm, Iwaki, Fukushima 9708551, Japan
关键词
D O I
10.1107/S0907444908013590
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The enzyme urate oxidase catalyzes the conversion of uric acid to 5-hydroxyisourate, one of the steps in the ureide pathway. Arthrobacter globiformis urate oxidase (AgUOX) was crystallized and structures of crystals soaked in the substrate uric acid, the inhibitor 8-azaxanthin and allantoin have been determined at 1.9-2.2 angstrom resolution. The biological unit is a homotetramer and two homotetramers comprise the asymmetric crystallographic unit. Each subunit contains two T-fold domains of beta beta alpha alpha beta beta topology, which are usually found in purine- and pterin-binding enzymes. The uric acid substrate is bound tightly to the enzyme by interactions with Arg180, Leu222 and Gln223 from one subunit and with Thr67 and Asp68 of the neighbouring subunit in the tetramer. In the other crystal structures, lithium borate, 8-azaxanthin and allantoate are bound to the enzyme in a similar manner as uric acid. Based on these AgUOX structures, the enzymatic reaction mechanism of UOX has been proposed.
引用
收藏
页码:815 / 822
页数:8
相关论文
共 50 条
  • [21] Mechanistic aspects of the covalent flavoprotein dimethylglycine oxidase of Arthrobacter globiformis studied by stopped-flow spectrophotometry
    Basran, J
    Bhanji, N
    Basran, A
    Nietlispach, D
    Mistry, S
    Meskys, R
    Scrutton, NS
    BIOCHEMISTRY, 2002, 41 (14) : 4733 - 4743
  • [22] Time-resolved analysis of catalytic reaction of copper amine oxidase from Arthrobacter globiformis.
    Yamaguchi, Hiroshi
    Kataoka, Misumi
    Oya, Hiroko
    Tominaga, Ayuko
    Ohtsu, Masayuki
    Okajima, Toshihide
    Tanizawa, Katsuyuki
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2011, 67 : C225 - C225
  • [23] Construction, overexpression, and purification of Arthrobacter globiformis amine oxidase -: Strep-Tag II fusion protein
    Juda, GA
    Bollinger, JA
    Dooley, DM
    PROTEIN EXPRESSION AND PURIFICATION, 2001, 22 (03) : 455 - 461
  • [24] Intramolecular electron transfer rate between active-site copper and TPQ in Arthrobacter globiformis amine oxidase
    Eric M. Shepard
    David M. Dooley
    JBIC Journal of Biological Inorganic Chemistry, 2006, 11
  • [25] Trapping of a dopaquinone intermediate in the TPQ cofactor biogenesis in a copper-containing amine oxidase from Arthrobacter globiformis
    Moore, Robyn H.
    Spies, M. Ashley
    Culpepper, Matthew B.
    Murakawa, Takeshi
    Hirota, Shun
    Okajima, Toshihicle
    Tanizawa, Katsuyuki
    Mure, Minae
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (37) : 11524 - 11534
  • [26] Construction, overexpression, and purification of Arthrobacter globiformis amine oxidase Strep-tag II fusion protein.
    Juda, GA
    Dooley, DM
    JOURNAL OF INORGANIC BIOCHEMISTRY, 2001, 86 (01) : 284 - 284
  • [27] Intramolecular electron transfer rate between active-site copper and TPQ in Arthrobacter globiformis amine oxidase
    Shepard, Eric M.
    Dooley, David M.
    JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY, 2006, 11 (08): : 1039 - 1048
  • [28] Near-atomic resolution structures of urate oxidase complexed with its substrate and analogues: the protonation state of the ligand
    Gabison, Laure
    Chiadmi, Mohamed
    El Hajji, Mohamed
    Castro, Bertrand
    Colloc'h, Nathalie
    Prange, Thierry
    ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2010, 66 : 714 - 724
  • [29] Cloning, sequence analysis, and purification of choline oxidase from Arthrobacter globiformis:: a bacterial enzyme involved in osmotic stress tolerance
    Fan, F
    Ghanem, M
    Gadda, G
    ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS, 2004, 421 (01) : 149 - 158
  • [30] The copper-containing amine oxidase from Arthrobacter globiformis:: refinement at 1.55 and 2.20 Å resolution in two crystal forms
    Langley, David B.
    Duff, Anthony P.
    Freeman, Hans C.
    Guss, J. Mitchell
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2006, 62 : 1052 - 1057