Identification and Role of Regulatory Non-Coding RNAs in Listeria monocytogenes

被引:16
作者
Izar, Benjamin [1 ,2 ]
Abu Mraheil, Mobarak [1 ]
Hain, Torsten [1 ]
机构
[1] Univ Giessen, Inst Med Microbiol, D-35392 Giessen, Germany
[2] Massachusetts Gen Hosp, Dept Internal Med, Boston, MA 02118 USA
关键词
Listeria monocytogenes; sRNA; asRNA; riboswitch; non-coding RNA; regulatory RNA; RNA-Seq; whole genome tiling arrays; infection; UTR; GENOME-WIDE ANALYSIS; CONTROLS EXPRESSION; VIRULENCE; GENES; HFQ; STREPTOCOCCUS; SALMONELLA; PREDICTION; PROTEINS; SIGMA(B);
D O I
10.3390/ijms12085070
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Bacterial regulatory non-coding RNAs control numerous mRNA targets that direct a plethora of biological processes, such as the adaption to environmental changes, growth and virulence. Recently developed high-throughput techniques, such as genomic tiling arrays and RNA-Seq have allowed investigating prokaryotic cis- and trans-acting regulatory RNAs, including sRNAs, asRNAs, untranslated regions (UTR) and riboswitches. As a result, we obtained a more comprehensive view on the complexity and plasticity of the prokaryotic genome biology. Listeria monocytogenes was utilized as a model system for intracellular pathogenic bacteria in several studies, which revealed the presence of about 180 regulatory RNAs in the listerial genome. A regulatory role of non-coding RNAs in survival, virulence and adaptation mechanisms of L. monocytogenes was confirmed in subsequent experiments, thus, providing insight into a multifaceted modulatory function of RNA/mRNA interference. In this review, we discuss the identification of regulatory RNAs by high-throughput techniques and in their functional role in L. monocytogenes.
引用
收藏
页码:5070 / 5079
页数:10
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