A Serum Protein-Based Algorithm for the Detection of Alzheimer Disease

被引:193
作者
O'Bryant, Sid E. [1 ]
Xiao, Guanghua [2 ]
Barber, Robert [5 ]
Reisch, Joan [2 ]
Doody, Rachelle [7 ]
Fairchild, Thomas [6 ]
Adams, Perrie [3 ]
Waring, Steven [8 ]
Diaz-Arrastia, Ramon [4 ]
机构
[1] Texas Tech Univ, Hlth Sci Ctr, Dept Neurol, F Marie Hall Inst Rural & Community Hlth, Lubbock, TX 79430 USA
[2] Univ Texas SW Med Ctr Dallas, Dept Clin Sci, Dallas, TX 75390 USA
[3] Univ Texas SW Med Ctr Dallas, Dept Psychiat, Dallas, TX 75390 USA
[4] Univ Texas SW Med Ctr Dallas, Dept Neurol, Dallas, TX 75390 USA
[5] Univ N Texas, Hlth Sci Ctr, Dept Pharmacol & Neurosci, Ft Worth, TX USA
[6] Univ N Texas, Hlth Sci Ctr, Off Strategy & Measurement, Ft Worth, TX USA
[7] Baylor Coll Med, Dept Neurol, Houston, TX 77030 USA
[8] Marshfield Clin Res Fdn, Epidemiol Res Ctr, Marshfield, WI USA
基金
美国国家卫生研究院;
关键词
DIAGNOSIS;
D O I
10.1001/archneurol.2010.215
中图分类号
R74 [神经病学与精神病学];
学科分类号
摘要
Objective: To develop an algorithm that separates patients with Alzheimer disease (AD) from controls. Design: Longitudinal case-control study. Setting: The Texas Alzheimer's Research Consortium project. Patients: We analyzed serum protein based multiplex biomarker data from 197 patients diagnosed with AD and 203 controls. Main Outcome Measure: The total sample was randomized equally into training and test sets and random forest methods were applied to the training set to create a biomarker risk score. Results: The biomarker risk score had a sensitivity and specificity of 0.80 and 0.91, respectively, and an area un-der the curve of 0.91 in detecting AD. When age, sex, education, and APOE status were added to the algorithm, the sensitivity, specificity, and area under the curve were 0.94, 0.84, and 0.95, respectively. Conclusions: These initial data suggest that serum protein-based biomarkers can be combined with clinical information to accurately classify AD. A disproportionate number of inflammatory and vascular markers were weighted most heavily in the analyses. Additionally, these markers consistently distinguished cases from controls in significant analysis of microarray, logistic regression, and Wilcoxon analyses, suggesting the existence of an inflammatory-related endophenotype of AD that may provide targeted therapeutic opportunities for this subset of patients.
引用
收藏
页码:1077 / 1081
页数:5
相关论文
共 10 条
[1]  
[Anonymous], R LANG ENV STAT COMP
[2]  
BAIR E, 2004, PREDICTION SUPERVISE
[3]   Random forests [J].
Breiman, L .
MACHINE LEARNING, 2001, 45 (01) :5-32
[4]   Association of low plasma Aβ42/Aβ40 ratios with increased imminent risk for mild cognitive impairment and Alzheimer disease [J].
Graff-Radford, Neill R. ;
Crook, Julia E. ;
Lucas, John ;
Boeve, Bradley F. ;
Knopman, David S. ;
Ivnik, Robert J. ;
Smith, Glenn E. ;
Younkin, Linda H. ;
Petersen, Ronald C. ;
Younkin, Steven G. .
ARCHIVES OF NEUROLOGY, 2007, 64 (03) :354-362
[5]  
MCKHANN G, 1984, NEUROLOGY, V34, P939, DOI 10.1212/WNL.34.7.939
[6]   Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values [J].
Pounds, S ;
Morris, SW .
BIOINFORMATICS, 2003, 19 (10) :1236-1242
[7]   Classification and prediction of clinical Alzheimer's diagnosis based on plasma signaling proteins [J].
Ray, Sandip ;
Britschgi, Markus ;
Herbert, Charles ;
Takeda-Uchimura, Yoshiko ;
Boxer, Adam ;
Blennow, Kaj ;
Friedman, Leah F. ;
Galasko, Douglas R. ;
Jutel, Marek ;
Karydas, Anna ;
Kaye, Jeffrey A. ;
Leszek, Jerzy ;
Miller, Bruce L. ;
Minthon, Lennart ;
Quinn, Joseph F. ;
Rabinovici, Gil D. ;
Robinson, William H. ;
Sabbagh, Marwan N. ;
So, Yuen T. ;
Sparks, D. Larry ;
Tabaton, Massimo ;
Tinklenberg, Jared ;
Yesavage, Jerome A. ;
Tibshirani, Robert ;
Wyss-Coray, Tony .
NATURE MEDICINE, 2007, 13 (11) :1359-1362
[8]   The role of biomarkers in clinical trials for Alzheimer disease [J].
Thal, LJ ;
Kantarci, K ;
Reiman, EM ;
Klunk, WE ;
Weiner, MW ;
Zetterberg, H ;
Galasko, D ;
Praticò, D ;
Griffin, S ;
Schenk, D ;
Siemers, E .
ALZHEIMER DISEASE & ASSOCIATED DISORDERS, 2006, 20 (01) :6-15
[9]   Significance analysis of microarrays applied to the ionizing radiation response [J].
Tusher, VG ;
Tibshirani, R ;
Chu, G .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (09) :5116-5121
[10]  
WARING S, 2008, TEXAS PUBLIC HLTH J, V60, P10