Current Scenario and Challenges in the Direct Identification of Microorganisms Using MALDI TOF MS

被引:26
作者
Han, Sang-Soo [1 ]
Jeong, Young-Su [2 ]
Choi, Sun-Kyung [2 ]
机构
[1] Agcy Def Dev, Adv Def Sci & Technol Res Inst, Daejeon 34186, South Korea
[2] Agcy Def Dev, Chem Biotechnol Ctr, Daejeon 34186, South Korea
关键词
microbial identification; MALDI TOF MS; machine learning; challenges; application; DESORPTION IONIZATION-TIME; ASSISTED-LASER-DESORPTION/IONIZATION; FLIGHT MASS-SPECTROMETRY; IN-SITU ANALYSIS; MICROBIAL IDENTIFICATION; COXIELLA-BURNETII; RAPID DETECTION; CLASSIFICATION; SENSITIVITY; PARTICLES;
D O I
10.3390/microorganisms9091917
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
MALDI TOF MS-based microbial identification significantly lowers the operational costs because of minimal requirements of substrates and reagents for extraction. Therefore, it has been widely used in varied applications such as clinical, food, military, and ecological research. However, the MALDI TOF MS method is laced with many challenges including its limitation of the reference spectrum. This review briefly introduces the background of MALDI TOF MS technology, including sample preparation and workflow. We have primarily discussed the application of MALDI TOF MS in the identification of microorganisms. Furthermore, we have discussed the current trends for bioaerosol detection using MALDI TOF MS and the limitations and challenges involved, and finally the approaches to overcome these challenges.
引用
收藏
页数:11
相关论文
共 74 条
  • [1] MALDI-TOF Mass Spectroscopy Applications in Clinical Microbiology
    Alizadeh, Maryam
    Yousefi, Leila
    Pakdel, Farzaneh
    Ghotaslou, Reza
    Rezaee, Mohammad Ahangarzadeh
    Khodadadi, Ehsaneh
    Oskouei, Mahin Ahangar
    Soroush Barhaghi, Mohammad Hossein
    Kafil, Hossein Samadi
    [J]. ADVANCES IN PHARMACOLOGICAL AND PHARMACEUTICAL SCIENCES, 2021, 2021
  • [2] Rapid detection of antibiotic resistance in positive blood cultures by MALDI-TOF MS and an automated and optimized MBT-ASTRA protocol for Escherichia coli and Klebsiella pneumoniae
    Axelsson, Carolina
    Rehnstam-Holm, Ann-Sofi
    Nilson, Bo
    [J]. INFECTIOUS DISEASES, 2020, 52 (01) : 45 - 53
  • [3] Rapid identification and typing of Listeria species by matrix-assisted laser desorption ionization-time of flight mass spectrometry
    Barbuddhe, Sukhadeo B.
    Maier, Thomas
    Schwarz, Gerold
    Kostrzewa, Markus
    Hof, Herbert
    Domann, Eugen
    Chakraborty, Trinad
    Hain, Torsten
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (17) : 5402 - 5407
  • [4] Identification of Campylobacter species and related organisms by matrix assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectrometry
    Bessede, E.
    Solecki, O.
    Sifre, E.
    Labadi, L.
    Megraud, F.
    [J]. CLINICAL MICROBIOLOGY AND INFECTION, 2011, 17 (11) : 1735 - 1739
  • [5] Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry as an Alternative to 16S rRNA Gene Sequencing for Identification of Difficult-To-Identify Bacterial Strains
    Bizzini, A.
    Jaton, K.
    Romo, D.
    Bille, J.
    Prod'hom, G.
    Greub, G.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (02) : 693 - 696
  • [6] Advances in Identification of Clinical Yeast Isolates by Use of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry
    Buchan, Blake W.
    Ledeboer, Nathan A.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2013, 51 (05) : 1359 - 1366
  • [7] Susceptibility Testing of Bacteria Using Maldi-Tof Mass Spectrometry
    Burckhardt, Irene
    Zimmermann, Stefan
    [J]. FRONTIERS IN MICROBIOLOGY, 2018, 9
  • [8] Identification of different respiratory viruses, after a cell culture step, by matrix assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS)
    Calderaro, Adriana
    Arcangeletti, Maria Cristina
    Rodighiero, Isabella
    Buttrini, Mirko
    Montecchini, Sara
    Simone, Rosita Vasile
    Medici, Maria Cristina
    Chezzi, Carlo
    De Conto, Flora
    [J]. SCIENTIFIC REPORTS, 2016, 6
  • [9] MALDI-TOF mass spectrometry as a potential tool for Trichomonas vaginalis identification
    Calderaro, Adriana
    Piergianni, Maddalena
    Montecchini, Sara
    Buttrini, Mirko
    Piccolo, Giovanna
    Rossi, Sabina
    Arcangeletti, Maria Cristina
    Medici, Maria Cristina
    Chezzi, Carlo
    De Conto, Flora
    [J]. BMC INFECTIOUS DISEASES, 2016, 16
  • [10] Recent Development of Rapid Antimicrobial Susceptibility Testing Methods through Metabolic Profiling of Bacteria
    Chen, Chen
    Hong, Weili
    [J]. ANTIBIOTICS-BASEL, 2021, 10 (03):