In-plate protein crystallization, in situ ligand soaking and X-ray diffraction

被引:62
作者
le Maire, Albane [2 ,3 ]
Gelin, Muriel [2 ,3 ]
Pochet, Sylvie [4 ]
Hoh, Francois [2 ,3 ]
Pirocchi, Michel [1 ,5 ,6 ]
Guichou, Jean-Francois [2 ,3 ]
Ferrer, Jean-Luc [1 ,5 ,6 ]
Labesse, Gilles [2 ,3 ]
机构
[1] CEA, Inst Biol Struct, Grp Synchrotron, F-38027 Grenoble, France
[2] Univ Montpellier 1 & 2, CNRS, Struct Biol Ctr, UMR5048, F-34090 Montpellier, France
[3] INSERM, U1054, F-34090 Montpellier, France
[4] Inst Pasteur, Unite Chim & Biocatalyse, F-75015 Paris, France
[5] Inst Biol Struct, CNRS, Grp Synchrotron, F-38027 Grenoble, France
[6] Univ Grenoble 1, Inst Biol Struct, Grp Synchrotron, F-38027 Grenoble, France
来源
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY | 2011年 / 67卷
关键词
CRYSTAL-STRUCTURE; CYCLOPHILIN-D; INHIBITOR; DETERMINANTS; SELECTIVITY; PIPELINE; ERK2;
D O I
10.1107/S0907444911023249
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
X-ray crystallography is now a recognized technique for ligand screening, especially for fragment-based drug design. However, protein crystal handling is still tedious and limits further automation. An alternative method for the solution of crystal structures of proteins in complex with small ligands is proposed. Crystallization drops are directly exposed to an X-ray beam after cocrystallization or soaking with the desired ligands. The use of dedicated plates in connection with an optimal parametrization of the G-rob robot allows efficient data collection. Three proteins currently under study in our laboratory for ligand screening by X-ray crystallography were used as validation test cases. The protein crystals belonged to different space groups, including a challenging monoclinic case. The resulting diffraction data can lead to clear ligand recognition, including indication of alternating conformations. These results demonstrate a possible method for automation of ligand screening by X-ray crystallography.
引用
收藏
页码:747 / 755
页数:9
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