Long-read human genome sequencing and its applications

被引:630
作者
Logsdon, Glennis A. [1 ]
Vollger, Mitchell R. [1 ]
Eichler, Evan E. [1 ,2 ]
机构
[1] Univ Washington, Sch Med, Dept Genome Sci, Seattle, WA USA
[2] Univ Washington, Howard Hughes Med Inst, Seattle, WA 98195 USA
基金
美国国家卫生研究院;
关键词
SINGLE-MOLECULE; DNA METHYLATION; STRUCTURAL VARIATION; TIME; ASSEMBLIES; RNA; IDENTIFICATION; DUPLICATION; 1Q21.1; MICRODELETIONS;
D O I
10.1038/s41576-020-0236-x
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Long-read sequencing is becoming more accessible and more accurate. In this Review, Logsdon et al. discuss the currently available platforms, how the technologies are being applied to assemble and phase human genomes, and their impact on improving our understanding of human genetic variation. Over the past decade, long-read, single-molecule DNA sequencing technologies have emerged as powerful players in genomics. With the ability to generate reads tens to thousands of kilobases in length with an accuracy approaching that of short-read sequencing technologies, these platforms have proven their ability to resolve some of the most challenging regions of the human genome, detect previously inaccessible structural variants and generate some of the first telomere-to-telomere assemblies of whole chromosomes. Long-read sequencing technologies will soon permit the routine assembly of diploid genomes, which will revolutionize genomics by revealing the full spectrum of human genetic variation, resolving some of the missing heritability and leading to the discovery of novel mechanisms of disease.
引用
收藏
页码:597 / 614
页数:18
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