Portable biosensor detection of the harmful dinoflagellate Alexandrium using surface plasmon resonance and peptide nucleic acid probes.

被引:0
作者
Bratcher, Amber R. [1 ]
Connell, Laurie B. [1 ]
Millard, Paul [2 ]
机构
[1] Univ Maine, Sch Marine Sci, 5735 Hitchner Hall, Orono, ME 04469 USA
[2] Univ Maine, Lab Surface Sci & Technol, Orono, ME 04469 USA
来源
OCEANS 2011 | 2011年
基金
美国国家科学基金会;
关键词
biosensor; SPR; PNA; Alexandrium HABs; PNA; DNA;
D O I
暂无
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
Paralytic shellfish poisoning (PSP) is a major human health issue that occurs worldwide. Species of the marine dinoflagellate genus Alexandrium can prooduce dangerous amounts of paralytic shellfish toxins responsible for PSP poisoning at extremely low cell densities. Current detection and identification methods for Alexandrium typically used by coastal managers are time-consuming, expensive, require special training, and are typically unable to distinguish between toxin-producing and non toxin-producing species. Therefore, there is a need for new methods to address these issues. We have developed a field-deployable method that uses surface plasmon resonance (SPR) and species-specific peptide nucleic acid probes to detect Alexandrium rRNA. This instrument has been tested using synthetic nucleotide sequences and validated against the industry-standard Biacore SPR instrument. This instrument can reliably discriminate between synthetic nucleotide sequences designed to mimic two species of Alexandrium found to co-occur in the Gulf of Maine, and also has a higher sensitivity to low nucleotide concentrations than the Biacore instrrument.
引用
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页数:3
相关论文
共 6 条
[1]  
Hallegraeff G.M., 2003, MANUAL HARMFUL MARIN, P25, DOI DOI 10.25607/OBP-1370
[2]   Kinetics for hybridization of peptide nucleic acids (PNA) with DNA and RNA studied with the BIAcore technique [J].
Jensen, KK ;
Orum, H ;
Nielsen, PE ;
Norden, B .
BIOCHEMISTRY, 1997, 36 (16) :5072-5077
[3]   DETERMINATION OF OPTICAL CONSTANTS OF METALS BY EXCITATION OF SURFACE PLASMONS [J].
KRETSCHM.E .
ZEITSCHRIFT FUR PHYSIK, 1971, 241 (04) :313-&
[4]   Mechanisms regulating large-scale seasonal fluctuations in Alexandrium fundyense populations in the Gulf of Maine:: Results from a physical-biological model [J].
McGillicuddy, DJ ;
Anderson, DM ;
Lynch, DR ;
Townsend, DW .
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY, 2005, 52 (19-21) :2698-2714
[5]   PEPTIDE NUCLEIC-ACID (PNA) - A DNA MIMIC WITH A PEPTIDE BACKBONE [J].
NIELSEN, PE ;
EGHOLM, M ;
BUCHARDT, O .
BIOCONJUGATE CHEMISTRY, 1994, 5 (01) :3-7
[6]  
SHUMWAY S E, 1988, Journal of Shellfish Research, V7, P643