Conformational preferences of α-substituted proline analogues

被引:42
作者
Flores-Ortega, Alejandra [2 ]
Jimenez, Ana I. [3 ]
Cativiela, Carlos [3 ]
Nussinov, Ruth [1 ,4 ]
Aleman, Carlos [2 ]
Casanovas, Jordi [5 ]
机构
[1] NCI, Ctr Canc Res Nanobiol Program, Basic Res Program, SAIC Frederick Inc, Ft Detrick, MD 21702 USA
[2] Univ Politecn Cataluna, ETS Engn Ind Barcelona, Dept Engn Quim, E-08028 Barcelona, Spain
[3] Univ Zaragoza, CSIC, Inst Ciencia Mat Aragon, Dept Quim Organ, E-50009 Zaragoza, Spain
[4] Tel Aviv Univ, Sch Med, Dept Human Genet Sackler, IL-69978 Tel Aviv, Israel
[5] Univ Lleida, Escola Politecn Super, Dept Quim, Lleida 25001, Spain
关键词
D O I
10.1021/jo702710x
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
DFT calculations at the B3LYP/6-31 +G(d,p) level have been used to investigate how the replacement of the alpha hydrogen by a more sterically demanding group affects the conformational preferences of proline. Specifically, the N-acetyl-N'-methylamide derivatives of L-proline, L-alpha-methylproline, and L-alpha-phenylproline have been calculated, with both the cis/trans isomerism of the peptide bonds and the puckering of the pyrrolidine ring being considered. The effects of solvation have been evaluated by using a Self-Consistent Reaction Field model. As expected, tetrasubstitution at the alpha carbon destabilizes the conformers with one or more peptide bonds arranged in cis. The lowest energy minimum has been found to be identical for the three compounds investigated, but important differences are observed regarding other energetically accessible backbone conformations. The results obtained provide evidence that the distinct steric requirements of the substituent at C-alpha may play a significant role in modulating the conformational preferences of proline.
引用
收藏
页码:3418 / 3427
页数:10
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