Gene fusion of heterophyletic gamma-globin genes in platyrrhine primates

被引:0
|
作者
Ignacio Arroyo, Jose [1 ,2 ,3 ]
Nery, Mariana F. [4 ]
机构
[1] Pontificia Univ Catolica Chile, Fac Ciencias Biol, Dept Ecol, Santiago 8331150, Chile
[2] IEB, Santiago 7800003, Chile
[3] Ctr Climate & Resilience Res CR 2, Santiago 8370449, Chile
[4] Univ Estadual Campinas, Inst Biol, Dept Genet Evolucao Microbiol & Imunol, BR-13148252 Campinas, SP, Brazil
关键词
gene duplication; gene fusion; gene conversion; recombination; globins; primates; NUCLEOTIDE-SEQUENCES; EVOLUTION; MODEL; TOOL;
D O I
10.1007/s12041-018-1039-0
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We performed phylogenetic analyses of HBG genes to assess its origin and interspecific variation among primates. Our analyses showed variation in HBG genes copy number ranging from one to three, some of them pseudogenes. For platyrrhines HBG genes, phylogenetic reconstructions of flanking regions recovered orthologous clades with distinct topologies for 5 and 3 flanking regions. The 5 region originated in the common ancestor of platyrrhines but the 3 region had an anthropoid origin. We hypothesize that the platyrrhine HBG genes of 5 and 3 heterophyletic origins arose from subsequent fusions of the (earlier) platyrrhine 5 portion and the (later) anthropoid 3 portion.
引用
收藏
页码:1473 / 1478
页数:6
相关论文
共 34 条
  • [21] Gene conversion and natural selection in the evolution of X-linked color vision genes in higher primates
    Zhou, YH
    Li, WH
    MOLECULAR BIOLOGY AND EVOLUTION, 1996, 13 (06) : 780 - 783
  • [22] SHEEP ALPHA-GLOBIN GENE-SEQUENCES - IMPLICATIONS FOR THEIR CONCERTED EVOLUTION AND FOR THE DOWN-REGULATION OF THE 3' GENES
    RISTALDI, MS
    CASULA, S
    RANDO, A
    VESTRI, R
    JOURNAL OF MOLECULAR EVOLUTION, 1995, 40 (04) : 349 - 353
  • [23] Detection of an α-Globin Fusion Gene Using Real-Time Polymerase Chain Reaction-Based Multicolor Melting Curve
    Ju, Ai-Ping
    Jiang, Fan
    Li, Jian
    Tang, Xue-Wei
    Li, Dong-Zhi
    HEMOGLOBIN, 2020, 44 (06) : 427 - 431
  • [24] An Graph-based Algorithm for Prioritizing Cancer Susceptibility Genes from Gene Fusion Data
    Zhang, Xuanping
    Xu, Mingzhe
    Wang, Yixuan
    Gao, Aiqing
    Zhao, Zhongmeng
    Huang, Yi
    Xiao, Xiao
    Wang, Jiayin
    2017 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE (BIBM), 2017, : 2204 - 2210
  • [25] The expanded cattle KIR genes are orthologous to the conserved single-copy KIR3DX1 gene of primates
    Lisbeth A. Guethlein
    Laurent Abi-Rached
    John A. Hammond
    Peter Parham
    Immunogenetics, 2007, 59 : 517 - 522
  • [26] The expanded cattle KIR genes are orthologous to the conserved single-copy KIR3DX1 gene of primates
    Guethlein, Lisbeth A.
    Abi-Rached, Laurent
    Hammond, John A.
    Parham, Peter
    IMMUNOGENETICS, 2007, 59 (06) : 517 - 522
  • [27] Phenotypic characterization with somatic genome editing and gene transfer reveals the diverse oncogenicity of ependymoma fusion genes
    Takadera, Mutsumi
    Satomi, Kaishi
    Szulzewsky, Frank
    Cimino, Patrick J.
    Holland, Eric C.
    Yamamoto, Tetsuya
    Ichimura, Koichi
    Ozawa, Tatsuya
    ACTA NEUROPATHOLOGICA COMMUNICATIONS, 2020, 8 (01)
  • [28] Expression pattern of the septin gene family in acute myeloid leukemias with and without MLL-SEPT fusion genes
    Santos, Joana
    Cerveira, Nuno
    Bizarro, Susana
    Ribeiro, Franclim R.
    Correia, Cecilia
    Torres, Lurdes
    Lisboa, Susana
    Vieira, Joana
    Mariz, Jose M.
    Norton, Lucilia
    Snijder, Simone
    Mellink, Clemens H.
    Buijs, Arjan
    Shih, Lee-Yung
    Strehl, Sabine
    Micci, Francesca
    Heim, Sverre
    Teixeira, Manuel R.
    LEUKEMIA RESEARCH, 2010, 34 (05) : 615 - 621
  • [29] Gene fusion and functional diversification of P450 genes facilitate thermophilic fungal adaptation to temperature change
    Li, Shuhong
    He, Jiangbo
    Wu, Qunfu
    Gou, Jianghui
    Wang, Donglou
    Niu, Xuemei
    MYCOLOGY-AN INTERNATIONAL JOURNAL ON FUNGAL BIOLOGY, 2024, 15 (03) : 485 - 505
  • [30] CONSERVED ORGANIZATION OF GAMMA-AMINOBUTYRIC ACIDA RECEPTOR GENES - CLONING AND ANALYSIS OF THE CHICKEN BETA-4-SUBUNIT GENE
    LASHAM, A
    VREUGDENHIL, E
    BATESON, AN
    BARNARD, EA
    DARLISON, MG
    JOURNAL OF NEUROCHEMISTRY, 1991, 57 (01) : 352 - 355