Trotter derivation of algorithms for Brownian and dissipative particle dynamics

被引:29
|
作者
Thalmann, Fabrice [1 ]
Farago, Jean
机构
[1] CNRS, UPR 22, Inst Charles Sadron, F-67083 Strasbourg, France
[2] Univ Strasbourg 1, F-67070 Strasbourg, France
来源
JOURNAL OF CHEMICAL PHYSICS | 2007年 / 127卷 / 12期
关键词
D O I
10.1063/1.2764481
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
This paper focuses on the temporal discretization of the Langevin dynamics, and on different resulting numerical integration schemes. Using a method based on the exponentiation of time dependent operators, we carefully derive a numerical scheme for the Langevin dynamics, which we found equivalent to the proposal of Ermak and Buckholtz [J. Comput. Phys. 35, 169 (1980)] and not simply to the stochastic version of the velocity-Verlet algorithm. However, we checked on numerical simulations that both algorithms give similar results, and share the same "weak order two" accuracy. We then apply the same strategy to derive and test two numerical schemes for the dissipative particle dynamics. The first one of them was found to compare well, in terms of speed and accuracy, with the best currently available algorithms. (C) 2007 American Institute of Physics.
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页数:20
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