Design and evaluation of 1,7-naphthyridones as novel KDM5 inhibitors

被引:16
作者
Labadie, Sharada S. [1 ]
Dragovich, Peter S. [1 ]
Cummings, Richard T. [2 ]
Deshmukh, Gauri [1 ]
Gustafson, Amy [1 ]
Han, Ning [3 ]
Harmange, Jean-Christophe [2 ]
Kiefer, James R. [1 ]
Li, Yue [3 ]
Liang, Jun [1 ]
Liederer, Bianca M. [1 ]
Liu, Yichin [1 ]
Manieri, Wanda [2 ]
Mao, Wiefeng [3 ]
Murray, Lesley [1 ]
Ortwine, Daniel F. [1 ]
Trojer, Patrick [2 ]
VanderPorten, Erica [1 ]
Vinogradova, Maia [1 ]
Wen, Li [3 ]
机构
[1] Genentech Inc, 1 DNA Way, San Francisco, CA 94080 USA
[2] Constellat Pharmaceut Inc, 215 First St,Suite 200, Cambridge, MA 02142 USA
[3] Wuxi Apptec, 288 Fute Zhong Rd, Shanghai 200131, Peoples R China
基金
美国国家卫生研究院;
关键词
Histone lysine demethylases; KDM5; inhibitors; Epigenetics; LYSINE DEMETHYLASE INHIBITORS; HISTONE DEMETHYLASES; CANCER-CELLS; DRUG DISCOVERY; TARGETS; FAMILY; IDENTIFICATION; DERIVATIVES; SURVIVAL; POTENT;
D O I
10.1016/j.bmcl.2016.07.070
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Features from a high throughput screening (HTS) hit and a previously reported scaffold were combined to generate 1,7-naphthyridones as novel KDM5 enzyme inhibitors with nanomolar potencies. These molecules exhibited high selectivity over the related KDM4C and KDM2B isoforms. An X-ray co-crystal structure of a representative molecule bound to KDM5A showed that these inhibitors are competitive with the co-substrate (2-oxoglutarate or 2-OG). (c) 2016 Elsevier Ltd. All rights reserved.
引用
收藏
页码:4492 / 4496
页数:5
相关论文
共 33 条
[21]   Recent Progress in Histone Demethylase Inhibitors [J].
McAllister, Tom E. ;
England, Katherine S. ;
Hopkinson, Richard J. ;
Brennan, Paul E. ;
Kawamura, Akane ;
Schofield, Christopher J. .
JOURNAL OF MEDICINAL CHEMISTRY, 2016, 59 (04) :1308-1329
[22]   Jumonji histone demethylases as emerging therapeutic targets [J].
Park, Sung Yeon ;
Park, Jong-Wan ;
Chun, Yang-Sook .
PHARMACOLOGICAL RESEARCH, 2016, 105 :146-151
[23]  
Rasmussen PB, 2014, EPIGENOMICS-UK, V6, P277, DOI [10.2217/EPI.14.14, 10.2217/epi.14.14]
[24]   A Temporarily Distinct Subpopulation of Slow-Cycling Melanoma Cells Is Required for Continuous Tumor Growth [J].
Roesch, Alexander ;
Fukunaga-Kalabis, Mizuho ;
Schmidt, Elizabeth C. ;
Zabierowski, Susan E. ;
Brafford, Patricia A. ;
Vultur, Adina ;
Basu, Devraj ;
Gimotty, Phyllis ;
Vogt, Thomas ;
Herlyn, Meenhard .
CELL, 2010, 141 (04) :583-594
[25]   Inhibition of 2-oxoglutarate dependent oxygenases [J].
Rose, Nathan R. ;
McDonough, Michael A. ;
King, Oliver N. F. ;
Kawamura, Akane ;
Schofield, Christopher J. .
CHEMICAL SOCIETY REVIEWS, 2011, 40 (08) :4364-4397
[26]   A Chromatin-Mediated Reversible Drug-Tolerant State in Cancer Cell Subpopulations [J].
Sharma, Sreenath V. ;
Lee, Diana Y. ;
Li, Bihua ;
Quinlan, Margaret P. ;
Takahashi, Fumiyuki ;
Maheswaran, Shyamala ;
McDermott, Ultan ;
Azizian, Nancy ;
Zou, Lee ;
Fischbach, Michael A. ;
Wong, Kwok-Kin ;
Brandstetter, Kathleyn ;
Wittner, Ben ;
Ramaswamy, Sridhar ;
Classon, Marie ;
Settleman, Jeff .
CELL, 2010, 141 (01) :69-80
[27]   ANTIALLERGY AGENTS .1. SUBSTITUTED 1,8-NAPHTHYRIDIN-2(1H)-ONES AS INHIBITORS OF SRS-A RELEASE [J].
SHERLOCK, MH ;
KAMINSKI, JJ ;
TOM, WC ;
LEE, JF ;
WONG, SC ;
KREUTNER, W ;
BRYANT, RW ;
MCPHAIL, AT .
JOURNAL OF MEDICINAL CHEMISTRY, 1988, 31 (11) :2108-2121
[28]  
Taberlay PC, 2011, PROG DRUG RES, V67, P1, DOI 10.1007/978-3-7643-8989-5_1
[29]   An inhibitor of KDM5 demethylases reduces survival of drug-tolerant cancer cells [J].
Vinogradova, Maia ;
Gehling, Victor S. ;
Gustafson, Amy ;
Arora, Shilpi ;
Tindell, Charles A. ;
Wilson, Catherine ;
Williamson, Kaylyn E. ;
Guler, Gulfem D. ;
Gangurde, Pranoti ;
Manieri, Wanda ;
Busby, Jennifer ;
Flynn, E. Megan ;
Lan, Fei ;
Kim, Hyo-jin ;
Odate, Shobu ;
Cochran, Andrea G. ;
Liu, Yichin ;
Wongchenko, Matthew ;
Yang, Yibin ;
Cheung, Tommy K. ;
Maile, Tobias M. ;
Lau, Ted ;
Costa, Michael ;
Hegde, Ganapati V. ;
Jackson, Erica ;
Pitti, Robert ;
Arnott, David ;
Bailey, Christopher ;
Bellon, Steve ;
Cummings, Richard T. ;
Albrecht, Brian K. ;
Harmange, Jean-Christophe ;
Kiefer, James R. ;
Trojer, Patrick ;
Classon, Marie .
NATURE CHEMICAL BIOLOGY, 2016, 12 (07) :531-+
[30]   Cell Penetrant Inhibitors of the KDM4 and KDM5 Families of Histone Lysine Demethylases. 2. Pyrido[3,4-d]pyrimidin-4(3H)-one Derivatives [J].
Westaway, Susan M. ;
Preston, Alex G. S. ;
Barker, Michael D. ;
Brown, Fiona ;
Brown, Jack A. ;
Campbell, Matthew ;
Chung, Chun-wa ;
Drewes, Gerard ;
Eagle, Robert ;
Garton, Neil ;
Gordon, Laurie ;
Haslam, Carl ;
Hayhow, Thomas G. ;
Humphreys, Philip G. ;
Joberty, Gerard ;
Katso, Roy ;
Kruidenier, Laurens ;
Leveridge, Melanie ;
Pemberton, Michelle ;
Rioja, Inma ;
Seal, Gail A. ;
Shipley, Tracy ;
Singh, Onkar ;
Suckling, Colin J. ;
Taylor, Joanna ;
Thomas, Pamela ;
Wilson, David M. ;
Lee, Kevin ;
Prinjha, Rab K. .
JOURNAL OF MEDICINAL CHEMISTRY, 2016, 59 (04) :1370-1387