A new lineage of halophilic, wall-less, contractile bacteria from a brine-filled deep of the Red Sea

被引:47
作者
Antunes, Andre [2 ]
Rainey, Fred A. [3 ]
Wanner, Gerhard [4 ]
Taborda, Marco [2 ]
Paetzold, Juergen [5 ]
Nobre, M. Fernanda [2 ]
da Costa, Milton S. [1 ]
Huber, Robert [6 ]
机构
[1] Univ Coimbra, Dept Biochem, P-3001401 Coimbra, Portugal
[2] Univ Coimbra, Ctr Neurociencias & Biol Celular, Dept Zool, P-3004517 Coimbra, Portugal
[3] Louisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USA
[4] Univ Munich, Dept Biol 1, D-80638 Munich, Germany
[5] Univ Bremen, Res Ctr Ocean Margins, D-28334 Bremen, Germany
[6] Kommunale Berufsfachschule Biol Tech Assistenten, D-94315 Straubing, Germany
关键词
D O I
10.1128/JB.01860-07
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel strictly anaerobic bacterium designated strain SSD-17B(T) was isolated from the hypersaline brine-sediment interface of the Shaban Deep, Red Sea. Cells were pleomorphic but usually consisted of a central coccoid body with one or two "tentacle-like" protrusions. These protrusions actively alternated between a straight, relaxed form and a contracted, corkscrew-like one. A peptidoglycan layer was not detected by electron microscopy. The organism forms "fried-egg"-like colonies on MM-X medium. The organism is strictly anaerobic and halophilic and has an optimum temperature for growth of about 30 to 37 degrees C and an optimum pH of about 7. Nitrate and nitrite are reduced; lactate is a fermentation product. The fatty acid profile is dominated by straight saturated and unsaturated chain compounds. Menaquinone 4 is the major respiratory quinone. Phyllogenetic analysis demonstrated strain SSD-17B(T) represents a novel and distinct lineage within the radiation of the domain Bacteria. The branching position of strain SSD-17B(T) was equidistant to the taxa considered to be representative lineages of the phyla Firmicutes and Tenericutes (with its sole class Mollicutes). The phenotypic and phylogenetic data clearly show the distinctiveness of this unusual bacterium, and we therefore propose that strain SSD-17B(T) (= DSM 18853 = JCM 14575) represents a new genus and a new species, for which we recommend the name Haloplasma contractile gen. nov., sp. nov. We are also of the opinion that the organism represents a new order-level taxon, for which we propose the name Haloplasmatales.
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页码:3580 / 3587
页数:8
相关论文
共 35 条
[1]   Salinisphaera shabanensis gen. nov., sp nov., a novel, moderately halophilic bacterium from the brine-seawater interface of the Shaban Deep, Red Sea [J].
Antunes, A ;
Eder, W ;
Fareleira, P ;
Santos, H ;
Huber, R .
EXTREMOPHILES, 2003, 7 (01) :29-34
[2]   Halorhabdus tiamatea sp nov., a non-pigmented, extremely halophilic archaeon from a deep-sea, hypersaline anoxic basin of the Red Sea, and emended description of the genus Halorhabdus [J].
Antunes, Andre ;
Taborda, Marco ;
Huber, Robert ;
Moissl, Christine ;
Nobre, M. Fernanda ;
da Costa, Milton S. .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 :215-220
[3]   METHANOGENS - RE-EVALUATION OF A UNIQUE BIOLOGICAL GROUP [J].
BALCH, WE ;
FOX, GE ;
MAGRUM, LJ ;
WOESE, CR ;
WOLFE, RS .
MICROBIOLOGICAL REVIEWS, 1979, 43 (02) :260-296
[5]   QUANTITATIVE INTERPRETATION OF X-RAY-DIFFRACTION PATTERNS OF MIXTURES .1. MATRIX-FLUSHING METHOD FOR QUANTITATIVE MULTICOMPONENT ANALYSIS [J].
CHUNG, FH .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1974, 7 (DEC1) :519-525
[6]   The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy [J].
Cole, JR ;
Chai, B ;
Marsh, TL ;
Farris, RJ ;
Wang, Q ;
Kulam, SA ;
Chandra, S ;
McGarrell, DM ;
Schmidt, TM ;
Garrity, GM ;
Tiedje, JM .
NUCLEIC ACIDS RESEARCH, 2003, 31 (01) :442-443
[7]   DISTRIBUTION OF ISOPRENOID QUINONE STRUCTURAL TYPES IN BACTERIA AND THEIR TAXONOMIC IMPLICATIONS [J].
COLLINS, MD ;
JONES, D .
MICROBIOLOGICAL REVIEWS, 1981, 45 (02) :316-354
[8]   Stratified prokaryote network in the oxic-anoxic transition of a deep-sea halocline [J].
Daffonchio, D ;
Borin, S ;
Brusa, T ;
Brusetti, L ;
van der Wielen, PWJJ ;
Bolhuis, H ;
Yakimov, MM ;
D'Auria, G ;
Giuliano, L ;
Marty, D ;
Tamburini, C ;
McGenity, TJ ;
Hallsworth, JE ;
Sass, AM ;
Timmis, KN ;
Tselepides, A ;
de Lange, GJ ;
Hübner, A ;
Thomson, J ;
Varnavas, SP ;
Gasparoni, F ;
Gerber, HW ;
Malinverno, E ;
Corselli, C ;
Garcin, J ;
McKew, B ;
Golyshin, PN ;
Lampadariou, N ;
Polymenakou, P ;
Calore, D ;
Cenedese, S ;
Zanon, F ;
Hoog, S .
NATURE, 2006, 440 (7081) :203-207
[9]  
Dyall-Smith ML., 2001, HALOHANDBOOK PROTOCO
[10]   Prokaryotic phylogenetic diversity and corresponding geochemical data of the brine-seawater interface of the Shaban Deep, Red Sea [J].
Eder, W ;
Schmidt, M ;
Koch, M ;
Garbe-Schönberg, D ;
Huber, R .
ENVIRONMENTAL MICROBIOLOGY, 2002, 4 (11) :758-763