Metabolic flux analysis as a tool in metabolic engineering of plants

被引:77
作者
Schwender, Joerg [1 ]
机构
[1] Brookhaven Natl Lab, Dept Biol, Upton, NY 11973 USA
关键词
D O I
10.1016/j.copbio.2008.02.006
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Methods of metabolic flux analysis (MFA) provide insights into the theoretical capabilities of metabolic networks and allow probing the in vivo performance of cellular metabolism. In recent years, an increasing awareness has developed that network analysis methods within the systems biology toolbox are serving to improve our understanding and ability to manipulate metabolism. In this minireview the potential of MFA to increase the chances of success in metabolic engineering of plants is presented, recent progress related to engineering and flux analysis in central metabolism of plants is discussed, and some recent advances in flux analysis methodology are highlighted.
引用
收藏
页码:131 / 137
页数:7
相关论文
共 76 条
  • [1] Compartment-specific labeling information in 13C metabolic flux analysis of plants
    Allen, Doug K.
    Shachar-Hill, Yalr
    Ohlrogge, John B.
    [J]. PHYTOCHEMISTRY, 2007, 68 (16-18) : 2197 - 2210
  • [2] Carbon conversion efficiency and central metabolic fluxes in developing sunflower (Helianthus annuus L.) embryos
    Alonso, Ana P.
    Goffman, Fernando D.
    Ohlrogge, John B.
    Shachar-Hill, Yair
    [J]. PLANT JOURNAL, 2007, 52 (02) : 296 - 308
  • [3] A metabolic flux analysis to study the role of sucrose synthase in the regulation of the carbon partitioning in central metabolism in maize root tips
    Alonso, Ana Paula
    Raymond, Philippe
    Hernould, Michel
    Rondeau-Mouro, Corinne
    de Graaf, Albert
    Chourey, Prem
    Lahaye, Marc
    Shachar-Hill, Yair
    Rolin, Dominique
    Dieuaide-Noubhani, Martine
    [J]. METABOLIC ENGINEERING, 2007, 9 (5-6) : 419 - 432
  • [4] Substrate cycles in the central metabolism of maize root tips under hypoxia
    Alonso, Ana Paula
    Raymond, Philippe
    Rolin, Dominique
    Dieuaide-Noubhani, Martine
    [J]. PHYTOCHEMISTRY, 2007, 68 (16-18) : 2222 - 2231
  • [5] A new substrate cycle in plants. evidence for a high glucose-phosphate-to-glucose turnover from in vivo steady-state and pulse-labeling experiments with [13C] glucose and [14C] glucose
    Alonso, AP
    Vigeolas, H
    Raymond, P
    Rolin, D
    Dieuaide-Noubhani, M
    [J]. PLANT PHYSIOLOGY, 2005, 138 (04) : 2220 - 2232
  • [6] Metabolic flux analysis in a nonstationary system:: Fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol
    Antoniewicz, Maciek R.
    Kraynie, David F.
    Laffend, Lisa A.
    Gonzalez-Lergier, Joanna
    Kelleher, Joanne K.
    Stephanopoulos, Gregory
    [J]. METABOLIC ENGINEERING, 2007, 9 (03) : 277 - 292
  • [7] Evaluation of regression models in metabolic physiology: predicting fluxes from isotopic data without knowledge of the pathway
    Antoniewicz, Maciek R.
    Stephanopoulos, Gregory
    Kelleher, Joanne K.
    [J]. METABOLOMICS, 2006, 2 (01) : 41 - 52
  • [8] Elementary metabolite units (EMU): A novel framework for modeling isotopic distributions
    Antoniewicz, Maciek R.
    Kelleher, Joanne K.
    Stephanopoulos, Gregory
    [J]. METABOLIC ENGINEERING, 2007, 9 (01) : 68 - 86
  • [9] Lessons from metabolic engineering for functional genomics and drug discovery
    Bailey, JE
    [J]. NATURE BIOTECHNOLOGY, 1999, 17 (07) : 616 - 618
  • [10] TOWARD A SCIENCE OF METABOLIC ENGINEERING
    BAILEY, JE
    [J]. SCIENCE, 1991, 252 (5013) : 1668 - 1675