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Integrative Metabolomic and Metallomic Analysis in a Case-Control Cohort With Parkinson's Disease
被引:17
|作者:
Lucio, Marianna
[1
]
Willkommen, Desiree
[1
]
Schroeter, Michael
[2
]
Sigaroudi, Ali
[3
,4
]
Schmitt-Kopplin, Philippe
[1
,5
]
Michalke, Bernhard
[1
]
机构:
[1] Helmholtz Zentrum Munchen, Analyt BioGeoChem, Neuherberg, Germany
[2] Uniklin Koln, Klin & Poliklin Neurol, Cologne, Germany
[3] Univ Spital Zurich, Klin Klin Pharmakol & Toxikol, Zurich, Switzerland
[4] Uniklin Koln, Zentrum Pharmakol, Inst Pharmakol 1, Cologne, Germany
[5] Tech Univ Munich, Life Sci Ctr Weihenstephan, Chair Analyt Food Chem, Munich, Germany
来源:
FRONTIERS IN AGING NEUROSCIENCE
|
2019年
/
11卷
关键词:
data integration;
metabolomics;
metallomics;
Block-sPLS-DA;
Parkinson's disease;
CEREBROSPINAL-FLUID;
MANGANESE EXPOSURE;
NEURODEGENERATION;
PREVALENCE;
COMPONENT;
METALS;
COPPER;
SERUM;
IRON;
D O I:
10.3389/fnagi.2019.00331
中图分类号:
R592 [老年病学];
C [社会科学总论];
学科分类号:
03 ;
0303 ;
100203 ;
摘要:
Parkinson's disease (PD) is a neurodegenerative disease with a complex etiology. Several factors are known to contribute to the disease onset and its progression. However, the complete underlying mechanisms are still escaping our understanding. To evaluate possible correlations between metabolites and metallomic data, in this research, we combined a control study measured using two different platforms. For the different data sources, we applied a Block Sparse Partial Least Square Discriminant Analysis (Block-sPLS-DA) model that allows for proving their relation, which in turn uncovers alternative influencing factors that remain hidden otherwise. We found two groups of variables that trace a strong relationship between metallomic and metabolomic parameters for disease development. The results confirmed that the redox active metals iron (Fe) and copper (Cu) together with fatty acids are the major influencing factors for the PD. Additionally, the metabolic waste product p-cresol sulfate and the trace element nickel (Ni) showed up as potentially important factors in PD. In summary, the data integration of different types of measurements emphasized the results of both stand-alone measurements providing a new comprehensive set of information and interactions, on PD disease, between different variables sources.
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页数:9
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