Joint detection of important biomarkers and optimal dose-response model using penalties

被引:3
作者
Vandenhende, F.
Eilers, P.
Ledent, E.
Renard, D.
Tibaldi, E.
机构
[1] Eli Lilly & Co, Global Stat, Mont St Guibert, Belgium
[2] Leiden Univ, Dept Med Stat, NL-2300 RA Leiden, Netherlands
关键词
biomarkers; penalty; dose-response;
D O I
10.1002/sim.2960
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
We propose a method to jointly detect influential biomarkers and estimate how they change with dose. The assessment is made in dose-ranging trials collecting multiple outcomes for efficacy, safety, pharmacokinetics or pharmacodynamics. We regress all these outcomes versus a non-parametric transformation of the dose. The regression coefficients and the parameters from the dose-response model are simultaneously estimated using a penalized alternating least-squares method. We illustrate the technique with a phase I clinical trial and a metabonomic experiment in rats. (C) 2007 John Wiley & Sons, Ltd.
引用
收藏
页码:4876 / 4888
页数:13
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