Ultrafast excited-state dynamics of isocytosine

被引:33
作者
Szabla, Rafal [1 ]
Gora, Robert W. [2 ]
Sponer, Jiri [1 ,3 ]
机构
[1] Acad Sci Czech Republ, Inst Biophys, Kralovopolska 135, CS-61265 Brno, Czech Republic
[2] Wroclaw Univ Technol, Dept Phys & Quantum Chem, Fac Chem, Wybrzeze Wyspianskiego 27, PL-50370 Wroclaw, Poland
[3] Masaryk Univ, CEITEC Cent European Inst Technol, Campus Bohunice,Kamenice 5, CZ-62500 Brno, Czech Republic
关键词
PERTURBATION-THEORY; RELAXATION MECHANISMS; PREBIOTIC CHEMISTRY; MOLECULAR-DYNAMICS; COUPLED-CLUSTER; PROTON-TRANSFER; AB-INITIO; WATER; RNA; EFFICIENT;
D O I
10.1039/c6cp01391k
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The alternative nucleobase isocytosine has long been considered as a plausible component of hypothetical primordial informational polymers. To examine this hypothesis we investigated the excited-state dynamics of the two most abundant forms of isocytosine in the gas phase (keto and enol). Our surface-hopping nonadiabatic molecular dynamics simulations employing the algebraic diagrammatic construction to the second order [ADC(2)] method for the electronic structure calculations suggest that both tautomers undergo efficient radiationless deactivation to the electronic ground state with time constants which amount to tau(keto) = 182 fs and tau(enol) = 533 fs. The dominant photorelaxation pathways correspond to ring-puckering (pi pi* surface) and C = O stretching/N-H tilting (n pi* surface) for the enol and keto forms respectively. Based on these findings, we infer that isocytosine is a relatively photostable compound in the gas phase and in these terms resembles biologically relevant nucleobases. The estimated S-1 -> T-1 intersystem crossing rate constant of 8.02 x 10(10) s(-1) suggests that triplet states might also play an important role in the overall excited-state dynamics of the keto tautomer. The reliability of ADC(2)-based surface-hopping molecular dynamics simulations was tested against multireference quantum-chemical calculations and the potential limitations of the employed ADC(2) approach are briefly discussed.
引用
收藏
页码:20208 / 20218
页数:11
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