A hitchhiker's guide to the MADS world of plants

被引:256
作者
Gramzow, Lydia [1 ]
Theissen, Guenter [1 ]
机构
[1] Univ Jena, Dept Genet, D-07743 Jena, Germany
关键词
PROTEIN-PROTEIN INTERACTIONS; GENOME-WIDE ANALYSIS; BOX GENES; FLOWER DEVELOPMENT; LAND PLANTS; ENDOSPERM DEVELOPMENT; NUCLEAR-LOCALIZATION; CRYSTAL-STRUCTURE; FLORAL QUARTETS; HOMEOTIC GENES;
D O I
10.1186/gb-2010-11-6-214
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Plant life critically depends on the function of MADS-box genes encoding MADS-domain transcription factors, which are present to a limited extent in nearly all major eukaryotic groups, but constitute a large gene family in land plants. There are two types of MADS-box genes, termed type I and type II, and in plants these groups are distinguished by exon-intron and domain structure, rates of evolution, developmental function and degree of functional redundancy. The type I genes are further subdivided into three groups - M alpha, M beta and M gamma - while the type II genes are subdivided into the MIKCC and MIKC* groups. The functional diversification of MIKCC genes is closely linked to the origin of developmental and morphological novelties in the sporophytic (usually diploid) generation of seed plants, most spectacularly the floral organs and fruits of angiosperms. Functional studies suggest different specializations for the different classes of genes; whereas type I genes may preferentially contribute to female gametophyte, embryo and seed development and MIKC*-group genes to male gametophyte development, the MIKCC-group genes became essential for diverse aspects of sporophyte development. Beyond the usual transcriptional regulation, including feedback and feed-forward loops, various specialized mechanisms have evolved to control the expression of MADS-box genes, such as epigenetic control and regulation by small RNAs. In future, more data from genome projects and reverse genetic studies will allow us to understand the birth, functional diversification and death of members of this dynamic and important family of transcription factors in much more detail.
引用
收藏
页数:11
相关论文
共 67 条
  • [31] The Polycomb-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1
    Köhler, C
    Hennig, L
    Spillane, C
    Pien, S
    Gruissem, W
    Grossniklaus, U
    [J]. GENES & DEVELOPMENT, 2003, 17 (12) : 1540 - 1553
  • [32] A possible working mechanism for rice SVP-group MADS-box proteins as negative regulators of brassinosteroid responses
    Lee, Shinyoung
    Jeong, Dong-Hoon
    An, Gynheung
    [J]. PLANT SIGNALING & BEHAVIOR, 2008, 3 (07) : 471 - 474
  • [33] Developmental Robustness by Obligate Interaction of Class B Floral Homeotic Genes and Proteins
    Lenser, Thorsten
    Theissen, Guenter
    Dittrich, Peter
    [J]. PLOS COMPUTATIONAL BIOLOGY, 2009, 5 (01)
  • [34] Genome-wide analysis of the MADS-box gene family in Populus trichocarpa
    Leseberg, Charles H.
    Li, Aili
    Kang, Hui
    Duvall, Melvin
    Mao, Long
    [J]. GENE, 2006, 378 : 84 - 94
  • [35] Evidence for alternative splicing of MADS-box transcripts in developing cotton fibre cells
    Lightfoot, Damien J.
    Malone, Katharine M.
    Timmis, Jeremy N.
    Orford, Sharon J.
    [J]. MOLECULAR GENETICS AND GENOMICS, 2008, 279 (01) : 75 - 85
  • [36] Regulatory mechanisms for floral homeotic gene expression
    Liu, Zhongchi
    Mara, Chloe
    [J]. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2010, 21 (01) : 80 - 86
  • [37] Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)
    Lu, Cheng
    Jeong, Dong-Hoon
    Kulkarni, Karthik
    Pillay, Manoj
    Nobuta, Kan
    German, Rana
    Thatcher, Shawn R.
    Maher, Christopher
    Zhang, Lifang
    Ware, Doreen
    Liu, Bin
    Cao, Xiaofeng
    Meyers, Blake C.
    Green, Pamela J.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (12) : 4951 - 4956
  • [38] CDD: a conserved domain database for interactive domain family analysis
    Marchler-Bauer, Aron
    Anderson, John B.
    Derbyshire, Myra K.
    DeWeese-Scott, Carol
    Gonzales, Noreen R.
    Gwadz, Marc
    Hao, Luning
    He, Siqian
    Hurwitz, David I.
    Jackson, John D.
    Ke, Zhaoxi
    Krylov, Dmitri
    Lanczycki, Christopher J.
    Liebert, Cynthia A.
    Liu, Chunlei
    Lu, Fu
    Lu, Shennan
    Marchler, Gabriele H.
    Mullokandov, Mikhail
    Song, James S.
    Thanki, Narmada
    Yamashita, Roxanne A.
    Yin, Jodie J.
    Zhang, Dachuan
    Bryant, Stephen H.
    [J]. NUCLEIC ACIDS RESEARCH, 2007, 35 : D237 - D240
  • [39] Nuclear localization of the Arabidopsis APETALA3 and PISTILLATA homeotic gene products depends on their simultaneous expression
    McGonigle, B
    Bouhidel, K
    Irish, VF
    [J]. GENES & DEVELOPMENT, 1996, 10 (14) : 1812 - 1821
  • [40] The naked and the dead: The ABCs of gymnosperm reproduction and the origin of the angiosperm flower
    Melzer, Rainer
    Wang, Yong-Qiang
    Theissen, Guenter
    [J]. SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2010, 21 (01) : 118 - 128