Guinea pig D-amino-acid oxidase cDNA and phylogenetic position

被引：9

作者：

Konno, R ^{[1
]}

Kurabayashi, A

Tsuchiya, M

Niwa, A

机构：

[1] Dokkyo Univ, Sch Med, Dept Microbiol, Mibu, Tochigi 3210293, Japan

[2] Univ Tsukuba, Inst Biol Sci, Tsukuba, Ibaraki 3058572, Japan

来源：

DNA SEQUENCE | 1999年 / 10卷 / 02期

关键词：

amino acid sequence; D-amino-acid oxidase; cDNA sequence; guinea pig; phylogenetic tree;

D O I：

10.3109/10425179909008422

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

The nucleotide sequence of cDNA that encodes guinea pig D-amino-acid oxidase (DAO) was determined. The cDNA consisted of 1,399 nucleotides and a poly(A) tail. The cDNA encodes 347 amino acid residues. In contrast to the hamster, rat, and mouse DAOs, guinea pig DAO had the 25th amino acid residue. The homology in amino acid sequences between the guinea pig DAO and the rodent DAOs was not high in comparison to the homology in amino acid sequences between the guinea pig DAO and DAOs of humans, pigs and rabbits. The phylogenetic position of the guinea pig varied depending on the source of sequences (amino acids or nucleotides) and the methods of phylogenetic tree construction. These results suggest that the guinea pig is not a simple rodent.

引用

页码：85 / 91

页数：7

共 25 条

[1] Amyloid precursor protein in guinea pigs - Complete cDNA sequence and alternative splicing [J].

Beck, M ;

Muller, D ;

Bigl, V .

BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION, 1997, 1351 (1-2) :17-21

[2] Phylogenetic position of guinea pigs revisited [J].

Cao, Y ;

Okada, N ;

Hasegawa, M .

MOLECULAR BIOLOGY AND EVOLUTION, 1997, 14 (04) :461-464

[3] The guinea-pig is not a rodent [J].

DErchia, AM ;

Gissi, C ;

Pesole, G ;

Saccone, C ;

Arnason, U .

NATURE, 1996, 381 (6583) :597-600

[4]

Felsenstein J, 1993, PHYLIP (Phylogeny Inference Package) version 3.5c

[5] MOLECULAR-CLONING AND SEQUENCE-ANALYSIS OF CDNAS ENCODING PORCINE KIDNEY D-AMINO-ACID OXIDASE [J].

FUKUI, K ;

WATANABE, F ;

SHIBATA, T ;

MIYAKE, Y .

BIOCHEMISTRY, 1987, 26 (12) :3612-3618

[6]

FUKUI K, 1992, J BIOL CHEM, V267, P18631

[7] IDENTIFICATION OF PEROXISOMAL TARGETING SIGNALS LOCATED AT THE CARBOXY TERMINUS OF 4 PEROXISOMAL PROTEINS [J].

GOULD, SJ ;

KELLER, GA ;

SUBRAMANI, S .

JOURNAL OF CELL BIOLOGY, 1988, 107 (03) :897-905

[8] Phylogenetic position of the order Lagomorpha (rabbits, hares and allies) [J].

Graur, D ;

Duret, L ;

Gouy, M .

NATURE, 1996, 379 (6563) :333-335

[9] IS THE GUINEA-PIG A RODENT [J].

GRAUR, D ;

HIDE, WA ;

LI, WH .

NATURE, 1991, 351 (6328) :649-652

[10] BRAIN AND KIDNEY D-AMINO-ACID OXIDASES ARE CODED BY A SINGLE GENE IN THE MOUSE [J].

KONNO, R ;

YASUMURA, Y .

JOURNAL OF NEUROCHEMISTRY, 1984, 42 (02) :584-586

← 1 2 3 →