Genetic variability in SQSTM1 and risk of early-onset Alzheimer dementia: a European early-onset dementia consortium study

被引:31
作者
Cuyvers, Elise [1 ,2 ,3 ]
van der Zee, Julie [1 ,2 ,3 ]
Bettens, Karolien [1 ,2 ,3 ]
Engelborghs, Sebastiaan [2 ,3 ,4 ,5 ]
Vandenbulcke, Mathieu [6 ,7 ,8 ]
Robberecht, Caroline [1 ,2 ,3 ]
Dillen, Lubina [1 ,2 ,3 ]
Merlin, Celine [1 ,2 ,3 ]
Geerts, Nathalie [1 ,2 ,3 ]
Graff, Caroline [9 ,10 ]
Thonberg, Hakan [9 ,10 ]
Chiang, Huei-Hsin [9 ]
Pastor, Pau [11 ,12 ,13 ]
Ortega-Cubero, Sara [11 ,13 ]
Pastor, Maria A. [13 ,14 ,15 ]
Diehl-Schmid, Janine [16 ]
Alexopoulos, Panagiotis [16 ]
Benussi, Luisa [17 ]
Ghidoni, Roberta [17 ]
Binetti, Giuliano [17 ]
Nacmias, Benedetta [18 ]
Sorbi, Sandro [18 ]
Sanchez-Valle, Raquel [19 ]
Llado, Albert [19 ]
Gelpi, Ellen [20 ]
Almeida, Maria Rosario [21 ]
Santana, Isabel [21 ]
Clarimon, Jordi [13 ,22 ]
Lleo, Alberto [13 ,22 ]
Fortea, Juan [13 ,22 ]
de Mendonca, Alexandre [23 ,24 ]
Martins, Madalena [23 ,24 ]
Borroni, Barbara [25 ]
Padovani, Alessandro [25 ]
Matej, Radoslav [26 ,27 ]
Rohan, Zdenek [26 ,27 ,28 ]
Ruiz, Agustin [29 ]
Frisoni, Giovanni B. [30 ,31 ,32 ,33 ]
Fabrizi, Gian Maria [34 ]
Vandenberghe, Rik [8 ,35 ]
De Deyn, Peter P. [2 ,3 ,4 ,5 ,36 ,37 ]
Van Broeckhoven, Christine [1 ,2 ,3 ]
Sleegers, Kristel [1 ,2 ,3 ]
机构
[1] VIB, Dept Mol Genet, Antwerp, Belgium
[2] Univ Antwerp, Inst Born Bunge, Neurogenet Lab, B-2020 Antwerp, Belgium
[3] Univ Antwerp, Inst Born Bunge, Lab Neurochem & Behav, B-2020 Antwerp, Belgium
[4] Hosp Network Antwerp Middelheim & Hoge Beuken, Dept Neurol, Antwerp, Belgium
[5] Hosp Network Antwerp Middelheim & Hoge Beuken, Memory Clin, Antwerp, Belgium
[6] Univ Leuven, Dept Old Age Psychiat, Leuven, Belgium
[7] Univ Leuven, Memory Clin, Leuven, Belgium
[8] Univ Hosp Leuven Gasthuisberg, Leuven, Belgium
[9] Karolinska Inst, Div Neurogeriatr, Ctr Alzheimer Res, Dept Neurobiol Care Sci & Soc NVS, Huddinge, Sweden
[10] Karolinska Univ Hosp, Genet Unit, Dept Geriatr Med, Stockholm, Sweden
[11] Univ Navarra, Ctr Appl Med Res, Div Neurosci, Neurogenet Lab, E-31080 Pamplona, Spain
[12] Hosp Univ Mutua Terrassa, Dept Neurol, Barcelona, Spain
[13] Inst Salud Carlos III, Ctr Invest Biomed Red Enfermedades Neurodegenerat, Madrid, Spain
[14] Univ Navarra, Ctr Appl Med Res CIMA, Div Neurosci, Neuroimaging Lab, E-31080 Pamplona, Spain
[15] Univ Navarra, Sch Med, Univ Navarra Clin, Dept Neurol, E-31080 Pamplona, Spain
[16] Tech Univ Munich, Dept Psychiat & Psychotherapy, D-80290 Munich, Germany
[17] Ist Ctr San Giovanni Dio Fatebenefratelli, IRCCS, Mol Markers Lab, Brescia, Italy
[18] Univ Florence, Dept Neurosci Psychol Drug Res & Child Hlth NEURO, Florence, Italy
[19] Hosp Clin Barcelona, Dept Neurol, Alzheimers Dis & Other Cognit Disorders Unit, Inst Invest Biomed August Pi & Sunyer IDIBAPS, Barcelona, Spain
[20] Hosp Clin Barcelona, Inst Invest Biomed August Pi & Sunyer IDIBAPS, Neurol Tissue Bank Biobanc, Barcelona, Spain
[21] Univ Coimbra, Ctr Neurosci & Cell Biol, Coimbra, Portugal
[22] Univ Autonoma Barcelona, Dept Neurol, IIB St Pau, Hosp Santa Creu & St Pau, E-08193 Barcelona, Spain
[23] Univ Lisbon, Fac Med, P-1699 Lisbon, Portugal
[24] Univ Lisbon, Inst Mol Med, P-1699 Lisbon, Portugal
[25] Univ Brescia, Neurol Unit, Brescia, Italy
[26] Charles Univ Prague, Fac Med 1, Dept Neurol, Ctr Clin Neurosci, Prague, Czech Republic
[27] Thomayer Hosp, Dept Pathol & Mol Med, Prague, Czech Republic
[28] Charles Univ Prague, Med Fac 3, Inst Pathol, Prague, Czech Republic
[29] Inst Catala Neurociencies Aplicades, Memory Clin Fundacio ACE, Barcelona, Spain
[30] Hop Cantonal Univ Geneva, Dept Med Interne Rehabil & Geriatrie, Geneva, Switzerland
[31] Hop Cantonal Univ Geneva, Dept Sante Mentale & Psychiat, Geneva, Switzerland
[32] Univ Geneva, Geneva, Switzerland
[33] IRCCS Fatebenefratelli, Alzheimers Neuroimaging & Epidemiol Lab, Brescia, Italy
[34] Univ Verona, Univ Hosp GB Rossi, Neurol Sect, Dept Neurol & Movements Sci, I-37100 Verona, Italy
[35] Univ Leuven, Dept Neurol, Lab Cognit Neurol, Leuven, Belgium
[36] Univ Groningen, Univ Med Ctr Groningen, Dept Neurol, Groningen, Netherlands
[37] Univ Groningen, Univ Med Ctr Groningen, Alzheimer Res Ctr, Groningen, Netherlands
基金
瑞典研究理事会;
关键词
SQSTM1/p62; Alzheimer's disease; Rare variants; Meta-analysis; European early-onset dementia consortium; PAGETS-DISEASE; FRONTOTEMPORAL DEMENTIA; NATIONAL INSTITUTE; SEQUESTOSOME; 1/P62; MUTATIONS; BONE; P62; SUSCEPTIBILITY; PATHOGENESIS; INCLUSIONS;
D O I
10.1016/j.neurobiolaging.2015.02.014
中图分类号
R592 [老年病学]; C [社会科学总论];
学科分类号
03 ; 0303 ; 100203 ;
摘要
Meta-analysis of existing genome-wide association studies on Alzheimer's disease (AD) showed subgenome-wide association of an intronic variant in the sequestosome 1 (SQSTM1) gene with AD. We performed targeted resequencing of SQSTM1 in Flanders-Belgian AD patients selected to be enriched for a genetic background (n = 435) and geographically matched nonaffected individuals (n = 872) to investigate the role of both common and rare SQSTM1 variants. Results were extended to the European earlyonset dementia cohorts (926 early-onset Alzheimer's disease [EOAD] patients and 1476 nonaffected individuals). Of the 61 detected exonic variants in SQSTM1, the majority were rare (n = 57). Rare variant (minor allele frequency <0.01) burden analysis did not reveal an increased frequency of rare variants in EOAD patients in any of the separate study populations nor when meta-analyzing all cohorts. Common variants p.D292- and p.R312- showed nominal association with AD (odds ratio(p.D292=) - 1.11 [95% confidence interval = 1-1.22], p = 0.04), only when including the Flanders-Belgian cohort in the meta-analysis. We cannot exclude a role of SQSTM1 genetic variability in late-onset AD, but our data indicate that SQSTM1 does not play a major role in the etiology of EOAD. (C) 2015 The Authors. Published by Elsevier Inc.
引用
收藏
页码:2005.e15 / 2005.e22
页数:8
相关论文
共 32 条
[21]   Optimized filtering reduces the error rate in detecting genomic variants by short-read sequencing [J].
Reumers, Joke ;
De Rijk, Peter ;
Zhao, Hui ;
Liekens, Anthony ;
Smeets, Dominiek ;
Cleary, John ;
Van Loo, Peter ;
Van Den Bossche, Maarten ;
Catthoor, Kirsten ;
Sabbe, Bernard ;
Despierre, Evelyn ;
Vergote, Ignace ;
Hilbush, Brian ;
Lambrechts, Diether ;
Del-Favero, Jurgen .
NATURE BIOTECHNOLOGY, 2012, 30 (01) :61-U103
[22]   SQSTM1 mutations in frontotemporal lobar degeneration and amyotrophic lateral sclerosis [J].
Rubino, Elisa ;
Rainero, Innocenzo ;
Chio, Adriano ;
Rogaeva, Ekaterina ;
Galimberti, Daniela ;
Fenoglio, Pierpaola ;
Grinberg, Yakov ;
Isaia, Giancarlo ;
Calvo, Andrea ;
Gentile, Salvatore ;
Bruni, Amalia Cecilia ;
St George-Hyslop, Peter Henry ;
Scarpini, Elio ;
Gallone, Salvatore ;
Pinessi, Lorenzo .
NEUROLOGY, 2012, 79 (15) :1556-1562
[23]   MutationTaster2: mutation prediction for the deep-sequencing age [J].
Schwarz, Jana Marie ;
Cooper, David N. ;
Schuelke, Markus ;
Seelow, Dominik .
NATURE METHODS, 2014, 11 (04) :361-362
[24]   Sequestosome 1/p62 is a polyubiquitin chain binding protein involved in ubiquitin proteasome degradation [J].
Seibenhener, ML ;
Babu, JR ;
Geetha, T ;
Wong, HC ;
Krishna, NR ;
Wooten, MW .
MOLECULAR AND CELLULAR BIOLOGY, 2004, 24 (18) :8055-8068
[25]   Sporadic ALS with compound heterozygous mutations in the SQSTM1 gene [J].
Shimizu, Hiroshi ;
Toyoshima, Yasuko ;
Shiga, Atsushi ;
Yokoseki, Akio ;
Arakawa, Keiko ;
Sekine, Yumi ;
Shimohata, Takayoshi ;
Ikeuchi, Takeshi ;
Nishizawa, Masatoyo ;
Kakita, Akiyoshi ;
Onodera, Osamu ;
Takahashi, Hitoshi .
ACTA NEUROPATHOLOGICA, 2013, 126 (03) :453-459
[26]   Mutations in SQSTM1 encoding p62 in amyotrophic lateral sclerosis: genetics and neuropathology [J].
Teyssou, Elisa ;
Takeda, Takahiro ;
Lebon, Vincent ;
Boillee, Severine ;
Doukoure, Brahima ;
Bataillon, Guillaume ;
Sazdovitch, Veronique ;
Cazeneuve, Cecile ;
Meininger, Vincent ;
LeGuern, Eric ;
Salachas, Francois ;
Seilhean, Danielle ;
Millecamps, Stephanie .
ACTA NEUROPATHOLOGICA, 2013, 125 (04) :511-522
[27]   Clinical heterogeneity in 3 unrelated families linked to VCP p.Arg159His [J].
van der Zee, J. ;
Pirici, D. ;
Van Langenhove, T. ;
Engelborghs, S. ;
Vandenberghe, R. ;
Hoffmann, M. ;
Pusswald, G. ;
Van den Broeck, M. ;
Peeters, K. ;
Mattheijssens, M. ;
Martin, J-J. ;
De Deyn, P. P. ;
Cruts, M. ;
Haubenberger, D. ;
Kumar-Singh, S. ;
Zimprich, A. ;
Van Broeckhoven, C. .
NEUROLOGY, 2009, 73 (08) :626-632
[28]   Rare mutations in SQSTM1 modify susceptibility to frontotemporal lobar degeneration [J].
van der Zee, Julie ;
Van Langenhove, Tim ;
Kovacs, Gabor G. ;
Dillen, Lubina ;
Deschamps, William ;
Engelborghs, Sebastiaan ;
Matej, Radoslav ;
Vandenbulcke, Mathieu ;
Sieben, Anne ;
Dermaut, Bart ;
Smets, Katrien ;
Van Damme, Philip ;
Merlin, Celine ;
Laureys, Annelies ;
Van Den Broeck, Marleen ;
Mattheijssens, Maria ;
Peeters, Karin ;
Benussi, Luisa ;
Binetti, Giuliano ;
Ghidoni, Roberta ;
Borroni, Barbara ;
Padovani, Alessandro ;
Archetti, Silvana ;
Pastor, Pau ;
Razquin, Cristina ;
Ortega-Cubero, Sara ;
Hernandez, Isabel ;
Boada, Merce ;
Ruiz, Agustin ;
de Mendonca, Alexandre ;
Miltenberger-Miltenyi, Gabriel ;
do Couto, Frederico Simoes ;
Sorbi, Sandro ;
Nacmias, Benedetta ;
Bagnoli, Silvia ;
Graff, Caroline ;
Chiang, Huei-Hsin ;
Thonberg, Hakan ;
Perneczky, Robert ;
Diehl-Schmid, Janine ;
Alexopoulos, Panagiotis ;
Frisoni, Giovanni B. ;
Bonvicini, Christian ;
Synofzik, Matthis ;
Maetzler, Walter ;
vom Hagen, Jennifer Muller ;
Schoels, Ludger ;
Haack, Tobias B. ;
Strom, Tim M. ;
Prokisch, Holger .
ACTA NEUROPATHOLOGICA, 2014, 128 (03) :397-410
[29]   A Pan-European Study of the C9orf72 Repeat Associated with FTLD: Geographic Prevalence, Genomic Instability, and Intermediate Repeats [J].
van der Zee, Julie ;
Gijselinck, Ilse ;
Dillen, Lubina ;
Van Langenhove, Tim ;
Theuns, Jessie ;
Engelborghs, Sebastiaan ;
Philtjens, Stephanie ;
Vandenbulcke, Mathieu ;
Sleegers, Kristel ;
Sieben, Anne ;
Baumer, Veerle ;
Maes, Githa ;
Corsmit, Ellen ;
Borroni, Barbara ;
Padovani, Alessandro ;
Archetti, Silvana ;
Perneczky, Robert ;
Diehl-Schmid, Janine ;
de Mendonca, Alexandre ;
Miltenberger-Miltenyi, Gabriel ;
Pereira, Sonia ;
Pimentel, Jose ;
Nacmias, Benedetta ;
Bagnoli, Silvia ;
Sorbi, Sandro ;
Graff, Caroline ;
Chiang, Huei-Hsin ;
Westerlund, Marie ;
Sanchez-Valle, Raquel ;
Llado, Albert ;
Gelpi, Ellen ;
Santana, Isabel ;
Almeida, Maria Rosario ;
Santiago, Beatriz ;
Frisoni, Giovanni ;
Zanetti, Orazio ;
Bonvicini, Cristian ;
Synofzik, Matthis ;
Maetzler, Walter ;
vom Hagen, Jennifer Mueller ;
Schoels, Ludger ;
Heneka, Michael T. ;
Jessen, Frank ;
Matej, Radoslav ;
Parobkova, Eva ;
Kovacs, Gabor G. ;
Stroebel, Thomas ;
Sarafov, Stayko ;
Tournev, Ivailo ;
Jordanova, Albena .
HUMAN MUTATION, 2013, 34 (02) :363-373
[30]   Novel VCP mutations in inclusion body myopathy associated with Paget disease of bone and frontotemporal dementia [J].
Watts, G. D. J. ;
Thomasova, D. ;
Ramdeen, S. K. ;
Fulchiero, E. C. ;
Mehta, S. G. ;
Drachman, D. A. ;
Weihl, C. C. ;
Jamrozik, Z. ;
Kwiecinski, H. ;
Kaminska, A. ;
Kimonis, V. E. .
CLINICAL GENETICS, 2007, 72 (05) :420-426