High-throughput solubility assay for purified recombinant protein immunogens

被引:15
作者
Stenvall, M [1 ]
Steen, J [1 ]
Uhlén, M [1 ]
Hober, S [1 ]
Ottosson, J [1 ]
机构
[1] Royal Inst Technol, AlbaNova Univ Ctr, Dept Biotechnol, S-10691 Stockholm, Sweden
来源
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS | 2005年 / 1752卷 / 01期
关键词
protein solubility; high-throughput; in vitro assay; urea;
D O I
10.1016/j.bbapap.2005.07.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A high-throughput assay is described for analysis of the solubility of purified recombinant proteins. The assay is based on affinity purification of proteins in the presence of chaotropic agents followed by a dilution and incubation step to investigate the solubility in the absence of high concentrations of such agents. The assay can be performed in a 96-well format, which makes it well suited for high-throughput applications. For 125 recombinant proteins expressed as part of an antibody-based proteomics effort, experimental solubility data were compared to calculated hydrophobicity values based on the amino acid sequence of each protein. This comparison showed only weak correlation between the theoretical and experimental values, which emphasizes the importance of experimental assays to determine the solubility of recombinant proteins. (c) 2005 Elsevier B.V All rights reserved.
引用
收藏
页码:6 / 10
页数:5
相关论文
共 15 条
[1]   Selective enrichment of monospecific polyclonal antibodies for antibody-based proteomics efforts [J].
Agaton, C ;
Falk, R ;
Guthenberg, IH ;
Göstring, L ;
Uhlén, M ;
Hober, S .
JOURNAL OF CHROMATOGRAPHY A, 2004, 1043 (01) :33-40
[2]   Affinity proteomics for systematic protein profiling of chromosome 21 gene products in human tissues [J].
Agaton, C ;
Galli, J ;
Guthenberg, IH ;
Janzon, L ;
Hansson, M ;
Asplund, A ;
Brundell, E ;
Lindberg, S ;
Ruthberg, I ;
Wester, K ;
Wurtz, D ;
Höög, C ;
Lundeberg, J ;
Ståhl, S ;
Pontén, F ;
Uhlén, M .
MOLECULAR & CELLULAR PROTEOMICS, 2003, 2 (06) :405-414
[3]   Detection and prevention of protein aggregation before, during, and after purification [J].
Bondos, SE ;
Bicknell, A .
ANALYTICAL BIOCHEMISTRY, 2003, 316 (02) :223-231
[4]   Protein refolding for industrial processes [J].
Clark, ED .
CURRENT OPINION IN BIOTECHNOLOGY, 2001, 12 (02) :202-207
[5]   An improved dual-expression concept, generating high-quality antibodies for proteomics research [J].
Falk, R ;
Agaton, C ;
Kiesler, E ;
Jin, S ;
Wieslander, L ;
Visa, N ;
Hober, S ;
Ståhl, S .
BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY, 2003, 38 :231-239
[6]  
FOLKERS GE, 2003, J STRUCT FUNCT GENOM, V5, P119
[7]   Rapid screening for improved solubility of small human proteins produced as fusion proteins in Escherichia coli [J].
Hammarström, M ;
Hellgren, N ;
Van den Berg, S ;
Berglund, H ;
Härd, T .
PROTEIN SCIENCE, 2002, 11 (02) :313-321
[8]   PREDICTION OF PROTEIN ANTIGENIC DETERMINANTS FROM AMINO-ACID-SEQUENCES [J].
HOPP, TP ;
WOODS, KR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1981, 78 (06) :3824-3828
[9]   A SIMPLE METHOD FOR DISPLAYING THE HYDROPATHIC CHARACTER OF A PROTEIN [J].
KYTE, J ;
DOOLITTLE, RF .
JOURNAL OF MOLECULAR BIOLOGY, 1982, 157 (01) :105-132
[10]   High-throughput protein expression of cDNA products as a tool in functional genomics [J].
Larsson, M ;
Gräslund, S ;
Li, YB ;
Brundell, E ;
Uhlén, M ;
Höög, C ;
Stähl, S .
JOURNAL OF BIOTECHNOLOGY, 2000, 80 (02) :143-157