The miR-183/182/96 cluster functions as a potential carcinogenic factor and prognostic factor in kidney renal clear cell carcinoma

被引:26
|
作者
Yuan, Jing [1 ]
Dong, Rui [1 ]
Liu, Fei [1 ]
Zhan, Lijun [1 ]
Liu, Yu [1 ]
Wei, Jun [1 ]
Wang, Ninghua [1 ]
机构
[1] Wuhan Univ Sci & Technol, Hanyang Hosp, Dept Urol, 53 Ink Lake Rd, Wuhan 430050, Hubei, Peoples R China
关键词
kidney renal clear cell carcinoma; microRNA-183; 182; 96; carcinogenic factor; prognostic factor; bioinformatics; DOWN-REGULATION; CANCER; PROLIFERATION; EXPRESSION; MIRNA; IDENTIFICATION; MICRORNAS; EPIGENOMICS; BIOMARKERS; INVASION;
D O I
10.3892/etm.2019.7221
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Kidney renal clear cell carcinoma (KIRC) is the most common type of renal cell carcinoma. While a number of treatments have been developed over the past few decades, the prognosis of patients with KIRC remains poor due to tumor metastasis and recurrence. Therefore, the molecular mechanisms of KIRC require to be elucidated in order to identify novel biomarkers. MicroRNAs (miRNAs/miRs) have been studied as important regulators of gene expression in a variety of cancer types. In the present study, a bioinformatics analysis of differentially expressed miRNAs in KIRC vs. normal tissues was performed based on raw miRNA expression data and patient information downloaded from the The Cancer Genome Atlas database. Furthermore, the clinical significance of differentially expressed miRNAs was evaluated, and their target genes and biological effects were further predicted. After applying the cut-off criteria of an absolute fold change of 2 and P<0.05, 127 differentially expressed miRNAs between KIRC and normal tissues were identified. The product of the miR-183/182/96 gene cluster, namely miR-183, miR-96 and miR-182, was revealed to be associated with multiple clinicopathological features of KIRC and to have a significant predictive and prognostic value. Subsequent functional enrichment analysis indicated that the target genes of the three miRNAs are associated with various Panther pathways, including the -adrenergic receptor signaling pathway, metabotropic glutamate receptor group I pathway, histamine H1 receptor-mediated signaling pathway and thyrotropin-releasing hormone receptor signaling pathway. In addition, major enriched gene ontology terms in the category biological process included the intracellular signaling cascade, cellular macromolecule catabolic process and response to DNA damage stimulus. Taken together, the present study suggested that miR-183, miR-96 and miR-182 may function as potential carcinogenic factors in KIRC and may be utilized as prognostic predictors.
引用
收藏
页码:2457 / 2464
页数:8
相关论文
共 50 条
  • [1] Cell type-Specific Functions of the miR-183/96/182 Cluster in the Cornea
    Gupta, Naman
    McClellan, Sharon
    Somayajulu, Mallika
    Pitchaikannu, Ahalya
    Hazlett, Linda D.
    Xu, Shunbin
    INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2023, 64 (08)
  • [2] MiR-183/96/182 cluster confers cell motile advantages in hepatocellular carcinoma
    Leung, Wilson
    He, Mian
    Law, Priscilla
    Ching, Arthur
    Chan, Anthony
    Wong, Nathalie
    CANCER RESEARCH, 2012, 72
  • [3] The miR-183/96/182 Cluster Regulates Macrophage Functions in Response to Pseudomonas aeruginosa
    Muraleedharan, Chithra K.
    McClellan, Sharon A.
    Ekanayaka, Sandamali A.
    Francis, Rebecca
    Zmejkoski, Alex
    Hazlett, Linda D.
    Xu, Shunbin
    JOURNAL OF INNATE IMMUNITY, 2019, 11 (04) : 347 - 358
  • [4] The miR-183/96/182 cluster is upregulated in glioblastoma carrying EGFR amplification
    Björn Schneider
    Doreen William
    Nora Lamp
    Annette Zimpfer
    Christian Henker
    Carl Friedrich Classen
    Andreas Erbersdobler
    Molecular and Cellular Biochemistry, 2022, 477 : 2297 - 2307
  • [5] The miR-183/96/182 cluster is upregulated in glioblastoma carrying EGFR amplification
    Schneider, Bjoern
    William, Doreen
    Lamp, Nora
    Zimpfer, Annette
    Henker, Christian
    Classen, Carl Friedrich
    Erbersdobler, Andreas
    MOLECULAR AND CELLULAR BIOCHEMISTRY, 2022, 477 (09) : 2297 - 2307
  • [6] The miR-183~96~182 cluster promotes tumorigenesis in a mouse model of medulloblastoma
    Zengdi Zhang
    Sanen Li
    Steven Y Cheng
    The Journal of Biomedical Research, 2013, 27 (06) : 486 - 494
  • [7] miR-183/96/182 cluster is an important morphogenetic factor targetingPAX6expression in differentiating human retinal organoids
    Peskova, Lucie
    Jurcikova, Denisa
    Vanova, Tereza
    Krivanek, Jan
    Capandova, Michaela
    Sramkova, Zuzana
    Sebestikova, Jana
    Kolouskova, Magdalena
    Kotasova, Hana
    Streit, Libor
    Barta, Tomas
    STEM CELLS, 2020, 38 (12) : 1557 - 1567
  • [8] Mutation Screening in the miR-183/96/182 Cluster in Patients With Inherited Retinal Dystrophy
    Xu, Shunbin
    Coku, Ardian
    Muraleedharan, Chithra K.
    Harajli, Ali
    Mishulin, Eric
    Dahabra, Chafic
    Choi, Joanne
    Garcia, William J.
    Webb, Kaylie
    Birch, David
    Goetz, Kerry
    Li, Weifeng
    FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY, 2020, 8
  • [9] Estrogen-mediated Regulation of MiR-183/96/182 Cluster Processing in the Vasculature
    Zhao, Jin
    Baur, Wendy E.
    Aronovitz, Mark
    Lu, Qing
    Karas, Richard H.
    CIRCULATION, 2012, 126 (21)
  • [10] Wnt/β-Catenin activates MiR-183/96/182 expression in hepatocellular carcinoma that promotes cell invasion
    Leung, Wilson K. C.
    He, Mian
    Chan, Anthony W. H.
    Law, Priscilla T. Y.
    Wong, Nathalie
    CANCER LETTERS, 2015, 362 (01) : 97 - 105