Human SMAD4 Genomic Variants Identified in Individuals with Heritable and Early-Onset Thoracic Aortic Disease

被引:1
作者
Bhave, Shreyas A. [1 ]
Guo, Dongchuan [2 ]
Angelov, Stoyan N. [3 ]
Bamshad, Michael J. [4 ]
Nickerson, Deborah A. [4 ]
Milewicz, Dianna M. [2 ]
Wallingford, Mary C. [1 ,5 ]
机构
[1] Tufts Med Ctr, Mol Cardiol Res Inst, Boston, MA 02111 USA
[2] Univ Texas Hlth Sci Ctr Houston UTHlth, Dept Internal Med, McGovern Med Sch, Houston, TX 77030 USA
[3] Univ Washington, Div Cardiol, Sch Med, Seattle, WA 98195 USA
[4] Univ Washington, Genome Sci, Seattle, WA 98195 USA
[5] Tufts Med Ctr, Mother Infant Res Inst, Boston, MA 02111 USA
关键词
genomic variants; hereditary hemorrhagic telangiectasia; thoracic aortic aneurysm; vascular malformations; SMAD4; STRUCTURAL BASIS; ANEURYSMS; DISSECTIONS; MUTATIONS; GENES;
D O I
10.3390/cardiogenetics11030015
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Thoracic aortic aneurysms (TAAs) that progress to acute thoracic aortic dissections (TADs) are life-threatening vascular events that have been associated with altered transforming growth factor (TGF) beta signaling. In addition to TAA, multiple genetic vascular disorders, including hereditary hemorrhagic telangiectasia (HHT), involve altered TGF beta signaling and vascular malformations. Due to the importance of TGF beta, genomic variant databases have been curated for activin receptor-like kinase 1 (ALK1) and endoglin (ENG). This case report details seven variants in SMAD4 that are associated with either heritable or early-onset aortic dissections and compares them to pathogenic exon variants in gnomAD v2.1.1. The TAA and TAD variants were identified through whole exome sequencing of 346 families with unrelated heritable thoracic aortic disease (HTAD) and 355 individuals with early-onset (age <= 56 years old) thoracic aortic dissection (ESTAD). An allele frequency filter of less than 0.05% was applied in the Genome Aggregation Database (gnomAD exome v2.1.1) with a combined annotation-dependent depletion score (CADD) greater than 20. These seven variants also have a higher REVEL score (>0.2), indicating pathogenic potential. Further in vivo and in vitro analysis is needed to evaluate how these variants affect SMAD4 mRNA stability and protein activity in association with thoracic aortic disease.
引用
收藏
页码:132 / 138
页数:7
相关论文
共 27 条
  • [1] Structural basis for the cooperative DNA recognition by Smad4 MH1 dimers
    Baburajendran, Nithya
    Jauch, Ralf
    Tan, Clara Yueh Zhen
    Narasimhan, Kamesh
    Kolatkar, Prasanna R.
    [J]. NUCLEIC ACIDS RESEARCH, 2011, 39 (18) : 8213 - 8222
  • [2] Structure of Smad1 MH1/DNA complex reveals distinctive rearrangements of BMP and TGF-β effectors
    BabuRajendran, Nithya
    Palasingam, Paaventhan
    Narasimhan, Kamesh
    Sun, Wenjie
    Prabhakar, Shyam
    Jauch, Ralf
    Kolatkar, Prasanna R.
    [J]. NUCLEIC ACIDS RESEARCH, 2010, 38 (10) : 3477 - 3488
  • [3] TGFB2 mutations cause familial thoracic aortic aneurysms and dissections associated with mild systemic features of Marfan syndrome
    Boileau, Catherine
    Guo, Dong-Chuan
    Hanna, Nadine
    Regalado, Ellen S.
    Detaint, Delphine
    Gong, Limin
    Varret, Mathilde
    Prakash, Siddharth K.
    Li, Alexander H.
    d'Indy, Hyacintha
    Braverman, Alan C.
    Grandchamp, Bernard
    Kwartler, Callie S.
    Gouya, Laurent
    Santos-Cortez, Regie Lyn P.
    Abifadel, Marianne
    Leal, Suzanne M.
    Muti, Christine
    Shendure, Jay
    Gross, Marie-Sylvie
    Rieder, Mark J.
    Vahanian, Alec
    Nickerson, Deborah A.
    Michel, Jean Baptiste
    Jondeau, Guillaume
    Milewicz, Dianna M.
    [J]. NATURE GENETICS, 2012, 44 (08) : 916 - +
  • [4] Structural basis for the Smad5 MH1 domain to recognize different DNA sequences
    Chai, Nan
    Li, Wan-Xin
    Wang, Jue
    Wang, Zhi-Xin
    Yang, Shi-Ming
    Wu, Jia-Wei
    [J]. NUCLEIC ACIDS RESEARCH, 2015, 43 (18) : 9051 - 9064
  • [5] Differential requirements for Smad4 in TGFβ-dependent patterning of the early mouse embryo
    Chu, GC
    Dunn, NR
    Anderson, DC
    Oxburgh, L
    Robertson, EJ
    [J]. DEVELOPMENT, 2004, 131 (15): : 3501 - 3512
  • [6] A structural variation reference for medical and population genetics
    Collins, Ryan L.
    Brand, Harrison
    Karczewski, Konrad J.
    Zhao, Xuefang
    Alfoldi, Jessica
    Francioli, Laurent C.
    Khera, Amit, V
    Lowther, Chelsea
    Gauthier, Laura D.
    Wang, Harold
    Watts, Nicholas A.
    Solomonson, Matthew
    O'Donnell-Luria, Anne
    Baumann, Alexander
    Munshi, Ruchi
    Walker, Mark
    Whelan, Christopher W.
    Huang, Yongqing
    Brookings, Ted
    Sharpe, Ted
    Stone, Matthew R.
    Valkanas, Elise
    Fu, Jack
    Tiao, Grace
    Laricchia, Kristen M.
    Ruano-Rubio, Valentin
    Stevens, Christine
    Gupta, Namrata
    Cusick, Caroline
    Margolin, Lauren
    Taylor, Kent D.
    Lin, Henry J.
    Rich, Stephen S.
    Post, Wendy S.
    Chen, Yii-Der Ida
    Rotter, Jerome, I
    Nusbaum, Chad
    Philippakis, Anthony
    Lander, Eric
    Gabriel, Stacey
    Neale, Benjamin M.
    Kathiresan, Sekar
    Daly, Mark J.
    Banks, Eric
    MacArthur, Daniel G.
    Talkowski, Michael E.
    [J]. NATURE, 2020, 581 (7809) : 444 - +
  • [7] Angiopoietin-2 Inhibition Rescues Arteriovenous Malformation in a Smad4 Hereditary Hemorrhagic Telangiectasia Mouse Model
    Crist, Angela M.
    Zhou, Xingyan
    Garai, Jone
    Lee, Amanda R.
    Thoele, Janina
    Ullmer, Christoph
    Klein, Christian
    Zabaleta, Jovanny
    Meadows, Stryder M.
    [J]. CIRCULATION, 2019, 139 (17) : 2049 - 2063
  • [8] Vascular deficiency of Smad4 causes arteriovenous malformations: a mouse model of Hereditary Hemorrhagic Telangiectasia
    Crist, Angela M.
    Lee, Amanda R.
    Patel, Nehal R.
    Westhoff, Dawn E.
    Meadows, Stryder M.
    [J]. ANGIOGENESIS, 2018, 21 (02) : 363 - 380
  • [9] SMAD4 rare variants in individuals and families with thoracic aortic aneurysms and dissections
    Duan, Xue-Yan
    Guo, Dong-chuan
    Regalado, Ellen S.
    Shen, Hong
    Coselli, Joseph S.
    Estrera, Anthony L.
    Safi, Hazim J.
    Bamshad, Michael J.
    Nickerson, Deborah A.
    LeMaire, Scott A.
    De Backer, Julie
    Milewicz, Dianna M.
    [J]. EUROPEAN JOURNAL OF HUMAN GENETICS, 2019, 27 (07) : 1054 - 1060
  • [10] Overlapping Spectra of SMAD4 Mutations in Juvenile Polyposis (JP) and JP-HHT Syndrome
    Gallione, Carol
    Aylsworth, Arthur S.
    Beis, Jill
    Berk, Terri
    Bernhardt, Barbara
    Clarks, Robin D.
    Clericuzio, Carol
    Danesino, Cesare
    Drautz, Joanne
    Fahl, Jeffrey
    Fan, Zheng
    Faughnan, Marie E.
    Ganguly, Arupa
    Garvie, John
    Henderson, Katharine
    Kini, Usha
    Leedom, Trace
    Ludman, Mark
    Lux, Andreas
    Maisenbacher, Melissa
    Mazzucco, Sara
    Olivieri, Carla
    van Amstel, Johannes K. Ploos
    Prigoda-Lee, Nadia
    Pyeritz, Reed E.
    Reardon, Willie
    Vandezande, Kirk
    Waldman, J. Deane
    White, Robert I., Jr.
    Williams, Charles A.
    Marchuk, Douglas A.
    [J]. AMERICAN JOURNAL OF MEDICAL GENETICS PART A, 2010, 152A (02) : 333 - 339