Two nearly complete mitogenomes of wheat stem borers, Cephus pygmeus (L.) and Cephus sareptanus Dovnar-Zapolskij (Hymenoptera: Cephidae): An unusual elongation of rrnS gene

被引:33
作者
Korkmaz, Ertan Mahir [1 ]
Dogan, Ozgul [1 ]
Budak, Mahir [1 ]
Basibuyuk, Hasan Huseyin [2 ]
机构
[1] Cumhuriyet Univ, Fac Sci, Dept Mol Biol & Genet, TR-58140 Sivas, Turkey
[2] Cumhuriyet Univ, Fac Sci, Dept Biol, TR-58140 Sivas, Turkey
关键词
Mitochondrial genome; Sawflies; rRNAs; Secondary structure; Strand asymmetry; Symphyta; COMPLETE MITOCHONDRIAL GENOME; TRANSFER-RNA GENES; NUCLEOTIDE COMPOSITION BIAS; SUBUNIT RIBOSOMAL-RNA; EVOLUTIONARY DYNAMICS; SECONDARY STRUCTURE; APIS-MELLIFERA; CONTROL REGION; SEQUENCE; INSECTA;
D O I
10.1016/j.gene.2014.12.069
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Two nearly complete mitochondrial genomes (mitogenomes) of wheat stem borers, Cephus pygmeus and Cephus sareptanus (Hymenoptera: Cephidae), were sequenced, characterised and compared with the previously known mitogenome of Cephus cinctus. The gene orders are mostly conserved, except for translocation of trnM and swapped position often! and trnQ. An A + T bias was found, but a deviation from strand asymmetry was also detected on the J strand. All protein coding genes (PCGs) are initiated by ATN codons, except for nad1, nad2 and atp8, and all are terminated with TAA, TA- or T- as a stop codon. The predicted secondary structures of rrnS and rrnL. genes are mostly consistent with reported hymenopteran species. However, an unusual elongation in rrnS, not know elsewhere in the order, was discovered in Cephus species. Three autonomous sequences detected in domains I and II are mainly responsible for the length expansions. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:254 / 264
页数:11
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