Michaelis-Menten relations for complex enzymatic networks

被引:25
作者
Kolomeisky, Anatoly B. [1 ]
机构
[1] Rice Univ, Dept Chem, Houston, TX 77005 USA
基金
美国国家科学基金会;
关键词
KINETIC-MODELS; MOLECULES;
D O I
10.1063/1.3580564
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Most biological processes are controlled by complex systems of enzymatic chemical reactions. Although the majority of enzymatic networks have very elaborate structures, there are many experimental observations indicating that some turnover rates still follow a simple Michaelis-Menten relation with a hyperbolic dependence on a substrate concentration. The original Michaelis-Menten mechanism has been derived as a steady-state approximation for a single-pathway enzymatic chain. The validity of this mechanism for many complex enzymatic systems is surprising. To determine general conditions when this relation might be observed in experiments, enzymatic networks consisting of coupled parallel pathways are investigated theoretically. It is found that the Michaelis-Menten equation is satisfied for specific relations between chemical rates, and it also corresponds to a situation with no fluxes between parallel pathways. Our results are illustrated for a simple model. The importance of the Michaelis-Menten relationship and derived criteria for single-molecule experimental studies of enzymatic processes are discussed. (C) 2011 American Institute of Physics. [doi:10.1063/1.3580564]
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页数:6
相关论文
共 19 条
[1]  
Alberts B., 2002, The shape and structure of proteins, Vfourth, DOI 10.1093/aob/mcg023
[2]  
CAO J, J PHYS CH B IN PRESS
[3]  
Cook P.F., 2007, ENZYME KINETICS MECH
[4]   Dynamic properties of molecular motors in the divided-pathway model [J].
Das, Rahul Kumar ;
Kolomeisky, Anatoly B. .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2009, 11 (24) :4815-4820
[5]   Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited [J].
English, BP ;
Min, W ;
van Oijen, AM ;
Lee, KT ;
Luo, GB ;
Sun, HY ;
Cherayil, BJ ;
Kou, SC ;
Xie, XS .
NATURE CHEMICAL BIOLOGY, 2006, 2 (02) :87-94
[6]  
Fersht A., 1999, Structure and Mechanism in Protein Science: A Guide to Enzyme Catalysis and Protein Folding
[7]   Theory of the statistics of kinetic transitions with application to single-molecule enzyme catalysis [J].
Gopich, IV ;
Szabo, A .
JOURNAL OF CHEMICAL PHYSICS, 2006, 124 (15)
[8]  
Houston P.L., 2001, Chemical Kinetics and Reaction Dynamics, VFirst
[9]   Periodic sequential kinetic models with jumping, branching and deaths [J].
Kolomeisky, AB ;
Fisher, ME .
PHYSICA A, 2000, 279 (1-4) :1-20
[10]   Exact results for parallel-chain kinetic models of biological transport [J].
Kolomeisky, AB .
JOURNAL OF CHEMICAL PHYSICS, 2001, 115 (15) :7253-7259