Genome-Wide Identification and Characterization of Caffeic Acid O-Methyltransferase Gene Family in Soybean

被引:23
|
作者
Zhang, Xu [1 ,2 ]
Chen, Bowei [1 ,2 ]
Wang, Lishan [1 ,2 ]
Ali, Shahid [1 ,2 ]
Guo, Yile [1 ,2 ]
Liu, Jiaxi [1 ,2 ]
Wang, Jiang [1 ,2 ]
Xie, Linan [1 ,2 ]
Zhang, Qingzhu [1 ,3 ]
机构
[1] Northeast Forestry Univ, Coll Life Sci, Harbin 150040, Peoples R China
[2] Northeast Forestry Univ, Coll Life Sci, Minist Educ, Key Lab Saline Alkali Vegetat Ecol Restorat, Harbin 150040, Peoples R China
[3] Northeast Forestry Univ, State Key Lab Tree Genet & Breeding, Harbin 150040, Peoples R China
来源
PLANTS-BASEL | 2021年 / 10卷 / 12期
基金
中国国家自然科学基金;
关键词
COMT; gene family; soybean; different stresses; LIGNIN BIOSYNTHESIS; MOLECULAR-CLONING; EXPRESSION; MELATONIN; DEPOSITION; PLANTCARE; GROWTH; COMT;
D O I
10.3390/plants10122816
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Soybean is one of the most important legumes, providing high-quality protein for humans. The caffeic acid O-methyltransferase (COMT) gene has previously been demonstrated to be a critical gene that regulates lignin production in plant cell walls and plays an important function in plant growth and development. However, the COMT gene family has not been studied in soybeans. In this study, 55 COMT family genes in soybean were identified by phylogenetic analysis and divided into two groups, I and II. The analysis of conserved domains showed that all GmCOMTs genes contained Methyltransferase-2 domains. Further prediction of cis-acting elements showed that GmCOMTs genes were associated with growth, light, stress, and hormonal responses. Eventually, based on the genomic data of soybean under different stresses, the results showed that the expression of GmCOMTs genes was different under different stresses, such as salt and drought stress. This study has identified and characterized the COMT gene family in soybean, which provides an important theoretical basis for further research on the biological functions of COMT genes and promotes revealing the role of GmCOMTs genes under stress resistance.
引用
收藏
页数:18
相关论文
共 50 条
  • [1] Genome-wide analysis of the Catalpa bungei caffeic acid O-methyltransferase (COMT) gene family: identification and expression profiles in normal, tension, and opposite wood
    Lu, Nan
    Ma, Wenjun
    Han, Donghua
    Liu, Ying
    Wang, Zhi
    Wang, Nan
    Yang, Guijuan
    Qu, Guanzheng
    Wang, Qiuxia
    Zhao, Kun
    Wang, Junhui
    PEERJ, 2019, 7
  • [2] Genome-Wide Identification of Caffeic Acid O-Methyltransferase Gene Family in Medicago truncatula: MtCOMT13-Mediated Salt and Drought Tolerance Enhancement
    Cui, Kailun
    Lv, Yanzhen
    Zhang, Zhao
    Sun, Qingying
    Yao, Xingjie
    Yan, Huifang
    AGRICULTURE-BASEL, 2024, 14 (08):
  • [3] Genome-Wide Identification, Characterization, and Expression Analysis of the Amino Acid Permease Gene Family in Soybean
    Zhang, Yuan
    Wang, Le
    Song, Bao-Hua
    Zhang, Dan
    Zhang, Hengyou
    AGRONOMY-BASEL, 2024, 14 (01):
  • [4] Genome-Wide Identification, Characterization and Expression Analysis of Soybean CHYR Gene Family
    Jia, Bowei
    Wang, Yan
    Zhang, Dajian
    Li, Wanhong
    Cui, Hongli
    Jin, Jun
    Cai, Xiaoxi
    Shen, Yang
    Wu, Shengyang
    Guo, Yongxia
    Sun, Mingzhe
    Sun, Xiaoli
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (22)
  • [5] Biochemical characterization of a putative wheat caffeic acid O-methyltransferase
    Zhou, Jian-Min
    Seo, Yong Weon
    Ibrahim, Ragai K.
    PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2009, 47 (04) : 322 - 326
  • [6] Genome-wide identification and analysis of the IQM gene family in soybean
    Lv, Tianxiao
    Liu, Qiongrui
    Xiao, Hong
    Fan, Tian
    Zhou, Yuping
    Wang, Jinxing
    Tian, Chang-en
    FRONTIERS IN PLANT SCIENCE, 2023, 13
  • [7] Identification and Functional Analysis of the Caffeic Acid O-Methyltransferase (COMT) Gene Family in Rice (Oryza sativa L.)
    Liang, Shaoming
    Xu, Shanbin
    Qu, Di
    Yang, Luomiao
    Wang, Jingguo
    Liu, Hualong
    Xin, Wei
    Zou, Detang
    Zheng, Hongliang
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (15)
  • [8] Caffeic acid o-methyltransferase fromPopulus deltoides: functional expression and characterization
    Bong Gyu Kim
    Yoon Jung Lee
    Younghee Park
    Yoongho Lim
    Joong-Hoon Ahn
    Journal of Plant Biology, 2006, 49 : 55 - 60
  • [9] Genome-Wide Identification and Expression Analysis of the VILLIN Gene Family in Soybean
    Zhou, Yueqiong
    He, Liangliang
    Zhou, Shaoli
    Wu, Qing
    Zhou, Xuan
    Mao, Yawen
    Zhao, Baolin
    Wang, Dongfa
    Zhao, Weiyue
    Wang, Ruoruo
    Hu, Huabin
    Chen, Jianghua
    PLANTS-BASEL, 2023, 12 (11):
  • [10] Characterization of an O-methyltransferase from soybean
    Kim, B. G.
    Lee, H. J.
    Park, Y.
    Lim, Y.
    Ahn, J. -H.
    PLANT PHYSIOLOGY AND BIOCHEMISTRY, 2006, 44 (04) : 236 - 241