Bioanalysis of siRNA and oligonucleotide therapeutics in biological fluids and tissues

被引:38
作者
Tremblay, Guy A. [1 ]
Oldfield, Philip R. [1 ]
机构
[1] Charles River Preclin & Clin Serv, Senneville, PQ H9X 3R3, Canada
关键词
PERFORMANCE LIQUID-CHROMATOGRAPHY; ELECTROSPRAY MASS-SPECTROMETRY; SHORT INTERFERING RNA; NUCLEIC-ACID; PHOSPHOROTHIOATE OLIGONUCLEOTIDE; ANTISENSE OLIGONUCLEOTIDE; IN-VITRO; CAPILLARY-ELECTROPHORESIS; HYBRIDIZATION ASSAY; METHOD VALIDATION;
D O I
10.4155/BIO.09.66
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
This article summarizes bioanalytical avenues for the determination of siRNA and oligonucleotide therapeutics, with an emphasis on hybridization methods. Aspects of the chemistry and delivery of investigational oligonucleotide therapeutics are considered. The nature of the oligonucleotide under investigation will dictate the best analytical course of action; each method has its advantages and disadvantages, depending upon the oligonucleotide test article and the anticipated toxicokinetic and pharmacokinetic study parameters. Stringent method development and specific validation criteria are essential to attain the best quality results in support of a regulatory filing.
引用
收藏
页码:595 / 609
页数:15
相关论文
共 110 条
[1]   Quantitation of microRNAs using a modified Invader assay [J].
Allawi, HT ;
Dahlberg, JE ;
Olson, S ;
Lund, E ;
Olson, M ;
Ma, WP ;
Takova, T ;
Neri, BP ;
Lyamichev, VI .
RNA, 2004, 10 (07) :1153-1161
[2]   Fully 2′-modified oligonucleotide duplexes with improved in vitro potency and stability compared to unmodified small interfering RNA [J].
Allerson, CR ;
Sioufi, N ;
Jarres, R ;
Prakash, TP ;
Naik, N ;
Berdeja, A ;
Wanders, L ;
Griffey, RH ;
Swayze, EE ;
Bhat, B .
JOURNAL OF MEDICINAL CHEMISTRY, 2005, 48 (04) :901-904
[3]   Pharmacokinetics, biodistribution, stability and toxicity of a cell-penetrating peptide-morpholino oligomer conjugate [J].
Amantana, Adams ;
Moulton, Hong M. ;
Cate, Melissa L. ;
Reddy, Muralimohan T. ;
Whitehead, Tom ;
Hassinger, Jed N. ;
Youngblood, Derek S. ;
Iversen, Patrick L. .
BIOCONJUGATE CHEMISTRY, 2007, 18 (04) :1325-1331
[4]   New procedure for the use of high-performance liquid chromatography electrospray ionization mass spectrometry for the analysis of nucleotides and oligonucleotides [J].
Apffel, A ;
Chakel, JA ;
Fischer, S ;
Lichtenwalter, K ;
Hancock, WS .
JOURNAL OF CHROMATOGRAPHY A, 1997, 777 (01) :3-21
[5]   The Piwi-piRNA pathway provides an adaptive defense in the transposon arms race [J].
Aravin, Alexei A. ;
Hannon, Gregory J. ;
Brennecke, Julius .
SCIENCE, 2007, 318 (5851) :761-764
[6]   Bioavailability and efficacy of antisense morpholino oligomers targeted to c-myc and cytochrome P-450 3A2 following oral administration in rats [J].
Arora, V ;
Knapp, DC ;
Reddy, MT ;
Weller, DD ;
Iversen, PL .
JOURNAL OF PHARMACEUTICAL SCIENCES, 2002, 91 (04) :1009-1018
[7]  
BAKER BF, 2000, Patent No. 6355438
[8]   Recent developments in mass spectrometry for the characterization of nucleosides, nucleotides, oligonucleotides, and nucleic acids [J].
Banoub, JH ;
Newton, RP ;
Esmans, E ;
Ewing, DF ;
Mackenzie, G .
CHEMICAL REVIEWS, 2005, 105 (05) :1869-1915
[9]   Recognition of nucleic acid and nucleic acid analogs by Toll-like receptors 7, 8 and 9 [J].
Bauer, Stefan ;
Pigisch, Stephanie ;
Hangel, Doris ;
Kaufmann, Andreas ;
Hamm, Svetlana .
IMMUNOBIOLOGY, 2008, 213 (3-4) :315-328
[10]   Electrospray ionization mass spectrometry of oligonucleotide complexes with drugs, metals, and proteins [J].
Beck, JL ;
Colgrave, ML ;
Ralph, SF ;
Sheil, MM .
MASS SPECTROMETRY REVIEWS, 2001, 20 (02) :61-87