To identify genes that are frequently downregulated in hepatocellular carcinoma (HCC), a panel of putative underexpressed genes was first established by an in-house cDNA macroarray method. Two different assays, semi-quantitative RT-PCR combined with Northern analysis and customized cDNA microarray analysis, were used to screen through these genes and the results were compared. Several genes, some with unknown function, were confirmed to be downregulated by both the methods. The effect of a downregulated gene, BMAL2, on cell proliferation was examined. Overexpression of antisense BMAL2 RNA in 293EBNA cells resulted in reduced cell cycle time, increased plating efficiency in soft agar, diminished TNF-alpha-induced increment of CPP32/caspase-3 activity, and a reduced proportion of cells in the G2 phase with a concomitantly increased proportion of cells in the S phase. In conclusion, by combining three different methods, we have obtained a panel of frequently down regulated genes in HCC, including BMAL2. Antisense overexpression of BMAL2 enhances cell proliferation.
机构:
Zhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Univ Southern Calif, Keck Sch Med, Dept Neurol, Los Angeles, CA 90089 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Qu, Meng
Zhang, Guoxin
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Univ Pittsburgh, Hillman Canc Ctr, Med Ctr, Pittsburgh, PA 15232 USA
Univ Pittsburgh, Dept Neurol, Med Ctr, Pittsburgh, PA 15232 USA
Univ Pittsburgh, Dept Neurol, Pittsburgh, PA 15232 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Zhang, Guoxin
Qu, Han
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Univ Calif Riverside, Dept Bot & Plant Sci, Riverside, CA 92521 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Qu, Han
Vu, Alexander
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Univ Southern Calif, Keck Sch Med, Dept Neurol, Los Angeles, CA 90089 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Vu, Alexander
Wu, Raymond
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Univ Southern Calif, Keck Sch Med, Southern Calif Res Ctr Alcohol Liver & Pancreat, Los Angeles, CA 90033 USA
Univ Southern Calif, Keck Sch Med, Dept Pathol, Los Angeles, CA 90033 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Wu, Raymond
Tsukamoto, Hidekazu
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Univ Southern Calif, Keck Sch Med, Southern Calif Res Ctr Alcohol Liver & Pancreat, Los Angeles, CA 90033 USA
Univ Southern Calif, Keck Sch Med, Dept Pathol, Los Angeles, CA 90033 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Tsukamoto, Hidekazu
Jia, Zhenyu
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Univ Calif Riverside, Dept Bot & Plant Sci, Riverside, CA 92521 USA
Univ Calif Riverside, Grad Program Genet Genom & Bioinformat, Riverside, CA 92521 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Jia, Zhenyu
Huang, Wendong
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City Hope Natl Med Ctr, Arthur Riggs Diabet & Metab Res Inst, Beckman Res Inst, Dept Diabet Complicat & Metab, Duarte, CA 91010 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Huang, Wendong
Lenz, Heinz-Josef
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Univ Southern Calif, Norris Comprehens Canc Ctr, Div Oncol, Los Angeles, CA 90032 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Lenz, Heinz-Josef
Rich, Jeremy N.
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Univ Pittsburgh, Hillman Canc Ctr, Med Ctr, Pittsburgh, PA 15232 USA
Univ Pittsburgh, Dept Neurol, Med Ctr, Pittsburgh, PA 15232 USA
Univ Pittsburgh, Dept Neurol, Pittsburgh, PA 15232 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China
Rich, Jeremy N.
Kay, Steve A.
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Univ Southern Calif, Keck Sch Med, Dept Neurol, Los Angeles, CA 90089 USAZhejiang Univ, Int Inst Med, Affiliated Hosp 4, Sch Med, Yiwu 322000, Zhejiang, Peoples R China