Evidence for flock transmission of individual subtypes and strains of avian influenza viruses: A monitoring study of wild birds in Kazakhstan

被引：3

作者：

Sultankulova, Kulyaisan T. ^{[1
]}

Dzhekebekov, Kuanysh K. ^{[1
]}

Orynbayev, Mukhit B. ^{[1
,2
]}

Burashev, Yerbol D. ^{[1
]}

Melisbek, Aibarys M. ^{[1
]}

Barmak, Sabyrkhan M. ^{[3
]}

Kozhabergenov, Nurlan S. ^{[1
]}

Issabek, Aisha U. ^{[1
]}

Chervyakova, Olga, V ^{[1
]}

Namet, Aidar M. ^{[4
]}

Zakarya, Kunsulu D. ^{[1
]}

Fereidouni, Sasan ^{[5
]}

机构：

[1] Comm Sci Minist Educ & Sci, Res Inst Biol Safety Problems RIBSP, Korday Dist, Zhambyl Region, Kazakhstan

[2] Zhangir Khan Univ, West Kazakhstan Tech Univ, Uralsk 090009, Kazakhstan

[3] Al Farabi Kazakh Natl Univ, Alma Ata, Kazakhstan

[4] MVA Grp Sci Res Prod Ctr Ltd, Alma Ata, Kazakhstan

[5] Univ Vet Med Vienna, Res Inst Wildlife Ecol, Vienna, Austria

来源：

VIRUS RESEARCH | 2022年 / 320卷

关键词：

Avian influenza virus; H3N8; subtype; Phylogenetic analysis; Kazakhstan; Wild birds monitoring; REVERSE-TRANSCRIPTASE PCR; A VIRUSES; DOMESTIC DUCKS; REASSORTMENT; AMPLIFICATION; GENES; ASSAY;

D O I：

10.1016/j.virusres.2022.198898

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

An active surveillance study of avian influenza viruses (AIVs) in wild birds was carried out in Kazakhstan in 2018-2019. In total, 866 samples were collected from wild birds and analyzed for influenza viruses using molecular and virological tests. Genome segments of Asian, European, and Australian lineages were detected in 25 (4.6%) out of 541 waterfowl samples positive for subtype H3N8, and in two (0.6%) out of 325 H3N8 positive samples from terrestrial birds. No highly pathogenic avian influenza virus (AIV) was detected. The results indicated transmission of closely related strains or identical subtypes of AIVs by a flock-unit of migratory birds or annual cyclical pattern of subtype dominance. The simultaneous circulation of genome segments of the Asian, European and Australian genetic lineages of H3N8 AIVs in wild birds in Kazakhstan indicated the important role of Central Asia as a transmission hub of AI viruses linking the East Asian migratory flyways with European flyways and vice versa.

引用

页数：7

共 33 条

[1] An overview of the epidemiology of avian influenza [J].

Alexander, Dennis J. .

VACCINE, 2007, 25 (30) :5637-5644

[2] Highly pathogenic avian influenza virus of the A/H5N8 subtype, clade 2.3.4.4b, caused outbreaks in Kazakhstan in 2020 [J].

Amirgazin, Asylulan ;

Shevtsov, Alexandr ;

Karibayev, Talgat ;

Berdikulov, Maxat ;

Kozhakhmetova, Tamila ;

Syzdykova, Laura ;

Ramankulov, Yerlan ;

Shustov, Alexandr, V .

PEERJ, 2022, 10

[3]

Boere G.C., 2006, Waterbirds Around the World, P40

[4] Genetic relationship of H3 subtype avian influenza viruses isolated from domestic ducks and wild birds in Korea and their pathogenic potential in chickens and ducks [J].

Choi, Jun-Gu ;

Kang, Hyun-Mi ;

Kim, Min-Chul ;

Paek, Mi-Ra ;

Kim, Hye-Ryoung ;

Kim, Bang-Sil ;

Kwon, Jun-Hun ;

Kim, Jae-Hong ;

Lee, Youn-Jeong .

VETERINARY MICROBIOLOGY, 2012, 155 (2-4) :147-157

[5]

Curco A., 2015, DOCUMENTS PARC, V2016

[6] A comprehensive analysis of reassortment in influenza A virus [J].

de Silva, U. Chandimal ;

Tanaka, Hokuto ;

Nakamura, Shota ;

Goto, Naohisa ;

Yasunaga, Teruo .

BIOLOGY OPEN, 2012, 1 (04) :385-390

[7] Complex Reassortment of Multiple Subtypes of Avian Influenza Viruses in Domestic Ducks at the Dongting Lake Region of China [J].

Deng, Guohua ;

Tan, Dan ;

Shi, Jianzhong ;

Cui, Pengfei ;

Jiang, Yongping ;

Liu, Liling ;

Tian, Guobin ;

Kawaoka, Yoshihiro ;

Li, Chengjun ;

Chen, Hualan .

JOURNAL OF VIROLOGY, 2013, 87 (17) :9452-9462

[8] Subtype Diversity of Influenza A Virus in North American Waterfowl: a Multidecade Study [J].

Diskin, Elena R. ;

Friedman, Kimberly ;

Krauss, Scott ;

Nolting, Jacqueline M. ;

Poulson, Rebecca L. ;

Slemons, Richard D. ;

Stallknecht, David E. ;

Webster, Robert G. ;

Bowman, Andrew S. .

JOURNAL OF VIROLOGY, 2020, 94 (11)

[9] Sample preparation for avian and porcine influenza virus cDNA amplification simplified: Boiling vs. conventional RNA extraction [J].

Fereidouni, Sasan R. ;

Starick, Elke ;

Ziller, Mario ;

Harder, Timm C. ;

Unger, Hermann ;

Hamilton, Keith ;

Globig, Anja .

JOURNAL OF VIROLOGICAL METHODS, 2015, 221 :62-67

[10] Saving resources: Avian influenza surveillance using pooled swab samples and reduced reaction volumes in real-time RT-PCR [J].

Fereidouni, Sasan R. ;

Harder, Timm C. ;

Gaidet, Nicolas ;

Ziller, Mario ;

Hoffmann, Bernd ;

Hammoumi, Saliha ;

Globig, Anja ;

Starick, Elke .

JOURNAL OF VIROLOGICAL METHODS, 2012, 186 (1-2) :119-125

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