Intramolecular vibrational redistribution in the non-radiative excited state decay of uracil in the gas phase: an ab initio molecular dynamics study

被引:6
|
作者
Carbonniere, Philippe [1 ]
Pouchan, Claude [1 ]
Improta, Roberto [2 ]
机构
[1] Univ Pau & Pays Adour, IPREM, Equipe Chim Phys Helioparc, UMR5254, F-64053 Pau 09, France
[2] CNR, IBB, I-80136 Naples, Italy
关键词
RESOLVED PHOTOELECTRON-SPECTROSCOPY; ULTRAFAST INTERNAL-CONVERSION; RELAXATION DYNAMICS; ENERGY FLOW; TRANSIENT ABSORPTION; STRUCTURAL DYNAMICS; CHEMICAL-DYNAMICS; COOLING DYNAMICS; RNA BASES; DNA;
D O I
10.1039/c4cp05265j
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We report a study of intramolecular vibrational distribution (IVR) occurring in the electronic ground state of uracil (S-0) in the gas phase, following photoexcitation in the lowest energy bright excited state (S pi) and decay through the ethylene-like S pi/S-0 Conical Intersection (CI-0 pi). To this aim we have performed 20 independent ab initio molecular dynamics simulations starting from CI-0 pi (ten of them with 1 eV kinetic energy randomly distributed over the different molecular degrees of freedom) and 10 starting from the ground state minimum (Franck-Condon, FC, point), with the excess kinetic energy equal to the energy gap between CI-0 pi and the FC point. The simulations, exploiting PBE0/6-31G(d) calculations, were performed over an overall period of 10 ps. A thorough statistical analysis of the variation of the geometrical parameters of uracil during the simulation time and of the distribution of the kinetic energy among the different vibrational degrees of freedom provides a consistent picture of the IVR process. In the first 0-200 fs the structural dynamics involve mainly the recovery of the average planarity. In the 200-600 fs time range, a substantial activation of CO and NH degrees of freedom is observed. After 500-600 fs most of the geometrical parameters reach average values similar to those found after 10 ps, though the system cannot be considered to be in equilibrium yet.
引用
收藏
页码:11615 / 11626
页数:12
相关论文
共 50 条
  • [1] Comparison of the non-radiative decay mechanisms of 4-pyrimidinone and uracil: an ab initio study
    Delchev, Vassil B.
    Sobolewski, Andrzej L.
    Domcke, Wolfgang
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2010, 12 (19) : 5007 - 5015
  • [2] Excited-state non-radiative decay in stilbenoid compounds: an ab initio quantum-chemistry study on size and substituent effects
    Izquierdo, Maria A.
    Shi, Junqing
    Oh, Sangyoon
    Park, Soo Young
    Milian-Medina, Begona
    Gierschner, Johannes
    Roca-Sanjuan, Daniel
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2019, 21 (40) : 22429 - 22439
  • [3] A gas phase ab initio excited state geometry optimization study of thymine, cytosine and uracil
    Shukla, MK
    Mishra, PC
    CHEMICAL PHYSICS, 1999, 240 (03) : 319 - 329
  • [4] Ultrafast non-radiative decay of gas-phase nucleosides
    De Camillis, Simone
    Miles, Jordan
    Alexander, Grace
    Ghafur, Omair
    Williams, Ian D.
    Townsend, Dave
    Greenwood, Jason B.
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2015, 17 (36) : 23643 - 23650
  • [5] Elucidating the Coupling Mechanisms of Rapid Intramolecular Vibrational Energy Redistribution in Nitromethane: Ab Initio Molecular Dynamics Simulation
    Lu, Meilin
    Zheng, Zhaoyang
    Zhu, Gangbei
    Wang, Yuxiao
    Yang, Yanqiang
    JOURNAL OF PHYSICAL CHEMISTRY A, 2020, 124 (40): : 8184 - 8191
  • [6] Ab initio molecular dynamics study of uracil in aqueous solution
    Gaigeot, MP
    Sprik, M
    JOURNAL OF PHYSICAL CHEMISTRY B, 2004, 108 (22): : 7458 - 7467
  • [7] Non-Radiative Electron-Hole Recombination in Silicon Clusters: Ab Initio Non-Adiabatic Molecular Dynamics
    Liu, Jin
    Neukirch, Amanda J.
    Prezhdo, Oleg V.
    JOURNAL OF PHYSICAL CHEMISTRY C, 2014, 118 (35): : 20702 - 20709
  • [8] Vibrational energy redistribution in crystalline nitromethane simulated by ab initio molecular dynamics
    Lu, Meilin
    Zheng, Zhaoyang
    Zhu, Gangbei
    Wang, Yuxiao
    Yang, Yanqiang
    RSC ADVANCES, 2021, 11 (16) : 9557 - 9567
  • [9] Ab initio molecular dynamics of excited-state intramolecular proton transfer using multireference perturbation theory
    Coe, Joshua D.
    Levine, Benjamin G.
    Martinez, Todd J.
    JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (44): : 11302 - 11310
  • [10] Elucidating ultrafast nonradiative decay of photoexcited uracil in aqueous solution by ab initio molecular dynamics
    Nieber, Harald
    Doltsinis, Nikos L.
    CHEMICAL PHYSICS, 2008, 347 (1-3) : 405 - 412